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Os03g0591700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.01 (0.0329) R2 : 0.656
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.05 (0.0783) R2dC : 0.136 R2C : 0.0784
β3 : -2.42 (0.0899) R2dE : 0.557 R2E : 0.452
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.561 (0.0696) R2dN8 : 0.0644 R2N8 : 0.00432
σ : 0.616
deviance : 174.66
__
_____
C
peak time of C : 11.5
E
wheather : wind
threshold : 0.8544
memory length : 282
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 0.667
open length of G : 6.18

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
162.91 0.6 6 0.528 1.07 -2.51 -0.606 -0.965 0.608 11.3 0.8028 280 0.816 6.02
164.92 0.598 5.99 0.564 1.05 -2.52 -0.685 -- 0.611 11.1 0.8246 279 0.741 6.09
164.41 0.597 6 0.504 1.07 -2.48 -- -0.954 0.607 11.3 0.8 279 0.783 6.06
166.78 0.601 6 0.552 1.05 -2.45 -- -- 0.609 11.4 0.8154 282 0.65 6.18
220.25 0.691 6.01 0.525 -- -2.31 -- -0.56 0.599 -- 0.8879 244 0.483 5.92
250.43 0.742 6.09 0.496 2.1 -- 0.777 -- 0.406 15.9 -- -- -- --
252.16 0.744 6.08 0.506 2.11 -- -- -- 0.411 15.9 -- -- -- --
218.28 0.688 6.03 0.537 -- -2.4 -- -- 0.54 -- 0.8737 299 0.349 5.17
174.66 0.616 6.01 -- 1.05 -2.42 -- -- 0.561 11.5 0.8544 282 0.667 6.18
495.92 1.04 6.08 0.419 -- -- -- -- 0.354 -- -- -- -- --
258.92 0.753 6.1 -- 2.1 -- -- -- 0.354 15.9 -- -- -- --
224.33 0.698 6.04 -- -- -2.6 -- -- 0.538 -- 1.2 308 0.167 5.36
500.56 1.04 6.09 -- -- -- -- -- 0.308 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 166.17 wind 1.0 270 > th dose independent rect. 1 6
2 168.61 wind 1.0 270 > th dose independent rect. 13 17
5 170.27 temperature 30.0 270 < th dose dependent rect. 3 2
6 170.28 wind 9.0 270 < th dose independent rect. 7 18
7 170.34 radiation 40.0 10 < th dose dependent rect. 13 20
8 170.65 radiation 40.0 90 < th dose independent rect. 13 19
9 170.68 wind 9.0 270 < th dose independent rect. 6 7
10 170.87 precipitation 0.1 270 < th dose independent rect. 6 7
11 170.87 precipitation 0.1 270 < th dose dependent rect. 6 7
12 170.90 radiation 20.0 270 < th dose dependent rect. 1 7
13 170.93 temperature 10.0 270 > th dose independent rect. 6 7
14 170.93 atmosphere 995.0 270 > th dose independent rect. 6 7
15 170.93 atmosphere 1015.0 270 < th dose independent rect. 6 7
16 170.93 temperature 10.0 270 > th dose independent rect. 13 17
17 170.93 precipitation 0.1 270 < th dose independent rect. 13 17
18 170.93 precipitation 0.1 270 < th dose dependent rect. 13 17
21 171.10 precipitation 0.1 270 < th dose independent rect. 1 6
22 171.10 precipitation 0.1 270 < th dose dependent rect. 1 6
27 171.35 radiation 20.0 90 < th dose independent rect. 3 6
28 171.65 wind 7.0 270 < th dose independent rect. 1 6
30 171.77 radiation 10.0 270 < th dose independent rect. 1 6
32 171.83 humidity 70.0 270 > th dose independent rect. 1 6
35 171.90 temperature 30.0 90 < th dose dependent rect. 3 5
38 172.23 temperature 10.0 270 > th dose independent rect. 1 6
40 172.23 temperature 30.0 270 < th dose independent rect. 1 6
41 172.23 humidity 50.0 270 > th dose independent rect. 1 6
43 172.23 atmosphere 995.0 270 > th dose independent rect. 1 6
44 172.23 atmosphere 1015.0 270 < th dose independent rect. 1 6
46 172.23 temperature 10.0 270 > th dose independent rect. 7 18
52 172.91 wind 9.0 270 < th dose independent rect. 6 20
53 172.92 wind 9.0 270 < th dose independent rect. 5 22
56 173.08 humidity 50.0 270 > th dose independent rect. 6 7
60 173.42 wind 9.0 270 < th dose independent rect. 13 17
61 173.45 precipitation 0.1 90 < th dose independent rect. 3 5
62 173.45 precipitation 0.1 90 < th dose dependent rect. 3 5
65 173.72 temperature 30.0 270 < th dose dependent rect. 1 5
69 173.91 radiation 40.0 270 < th dose independent rect. 13 17
70 173.93 humidity 70.0 90 > th dose independent rect. 3 6
72 174.01 radiation 40.0 90 < th dose dependent rect. 3 6
77 174.26 wind 7.0 90 < th dose independent rect. 3 5
91 174.46 radiation 1.0 270 > th dose independent rect. 6 7
93 174.47 temperature 10.0 90 > th dose independent rect. 3 5
95 174.47 temperature 30.0 90 < th dose independent rect. 3 5
96 174.47 humidity 50.0 90 > th dose independent rect. 3 5
98 174.47 atmosphere 995.0 90 > th dose independent rect. 3 5
99 174.47 atmosphere 1015.0 90 < th dose independent rect. 3 5
106 174.56 precipitation 0.1 270 < th dose independent rect. 3 2
108 174.56 precipitation 0.1 270 < th dose dependent rect. 3 2
113 174.90 atmosphere 995.0 270 > th dose independent rect. 13 17
114 174.92 radiation 10.0 270 < th dose independent rect. 2 4
130 175.05 temperature 10.0 270 > th dose independent rect. 6 20
132 175.13 wind 1.0 270 > th dose independent rect. 3 2
136 175.30 precipitation 0.1 270 < th dose independent rect. 7 18
137 175.30 precipitation 0.1 270 < th dose dependent rect. 7 18
141 175.45 wind 7.0 270 < th dose independent rect. 3 2
142 175.49 wind 9.0 10 < th dose independent rect. 9 18
149 175.62 precipitation 0.1 10 < th dose independent rect. 3 6
150 175.62 precipitation 0.1 10 < th dose dependent rect. 3 6
154 175.74 temperature 10.0 270 > th dose independent rect. 3 2
156 175.74 temperature 30.0 270 < th dose independent rect. 3 2
157 175.74 humidity 50.0 270 > th dose independent rect. 3 2
160 175.74 atmosphere 995.0 270 > th dose independent rect. 3 2
161 175.74 atmosphere 1010.0 270 < th dose independent rect. 3 2
163 175.74 radiation 20.0 270 < th dose independent rect. 3 2
166 175.74 temperature 10.0 270 > th dose independent rect. 5 22
167 175.77 radiation 40.0 270 < th dose dependent rect. 3 2
171 175.87 radiation 1.0 270 < th dose dependent rect. 3 2
173 175.88 radiation 1.0 270 < th dose independent rect. 3 2
178 176.03 radiation 10.0 270 < th dose dependent rect. 1 13
194 176.08 precipitation 0.1 90 < th dose independent rect. 8 7
195 176.08 precipitation 0.1 90 < th dose dependent rect. 8 7
201 176.20 radiation 30.0 10 < th dose independent rect. 13 20
213 176.59 wind 7.0 10 < th dose independent rect. 3 6
227 176.83 radiation 40.0 90 < th dose independent rect. 15 17
230 176.91 atmosphere 995.0 90 > th dose independent rect. 8 7
233 176.93 temperature 10.0 90 > th dose independent rect. 8 7
234 176.93 atmosphere 1015.0 90 < th dose independent rect. 8 7
243 177.19 temperature 10.0 10 > th dose independent rect. 3 6
245 177.19 temperature 30.0 10 < th dose independent rect. 3 6
246 177.19 humidity 50.0 10 > th dose independent rect. 3 6
248 177.19 atmosphere 995.0 10 > th dose independent rect. 3 6
249 177.19 atmosphere 1015.0 10 < th dose independent rect. 3 6
250 177.19 precipitation 0.1 270 < th dose independent rect. 2 15
251 177.19 temperature 10.0 10 > th dose independent rect. 9 18
252 177.19 precipitation 0.1 270 < th dose dependent rect. 2 15
253 177.21 radiation 40.0 10 < th dose independent rect. 3 6
258 177.28 radiation 1.0 90 > th dose independent rect. 8 7
262 177.29 wind 7.0 270 < th dose independent rect. 17 9
264 177.30 wind 9.0 90 < th dose independent rect. 8 7
280 177.58 radiation 10.0 270 < th dose independent rect. 17 9
285 177.66 precipitation 0.1 10 < th dose independent rect. 9 18
287 177.66 precipitation 0.1 10 < th dose dependent rect. 9 18
321 177.93 radiation 40.0 270 < th dose dependent rect. 17 9
345 178.25 temperature 10.0 270 > th dose independent rect. 17 9
349 178.25 temperature 10.0 270 > th dose independent rect. 2 15
350 178.25 atmosphere 1015.0 270 < th dose independent rect. 2 15
354 178.30 wind 1.0 270 > th dose independent rect. 11 9
358 178.39 radiation 1.0 10 > th dose independent rect. 9 6
373 178.44 precipitation 0.1 270 < th dose independent rect. 9 1
375 178.44 precipitation 0.1 270 < th dose dependent rect. 9 1
376 178.45 temperature 10.0 270 > th dose independent rect. 9 1
377 178.45 atmosphere 995.0 270 > th dose independent rect. 9 1
378 178.45 atmosphere 1015.0 270 < th dose independent rect. 9 1
379 178.45 temperature 10.0 270 > th dose independent rect. 10 23
382 178.50 wind 9.0 270 < th dose independent rect. 9 1
393 178.66 precipitation 0.1 270 < th dose independent rect. 6 20
394 178.66 precipitation 0.1 270 < th dose dependent rect. 6 20
397 178.75 humidity 50.0 270 > th dose independent rect. 9 1
403 178.87 humidity 50.0 270 > th dose independent rect. 17 9
407 179.02 atmosphere 995.0 90 > th dose independent rect. 8 19
436 179.33 radiation 40.0 10 < th dose independent rect. 15 18
462 179.40 atmosphere 1015.0 270 < th dose independent rect. 13 17
465 179.44 temperature 10.0 10 > th dose independent rect. 9 6
467 179.44 atmosphere 995.0 10 > th dose independent rect. 9 6
468 179.44 atmosphere 1015.0 10 < th dose independent rect. 9 6
469 179.44 precipitation 0.1 10 < th dose independent rect. 9 6
470 179.44 temperature 10.0 10 > th dose independent rect. 15 18
471 179.44 precipitation 0.1 10 < th dose dependent rect. 9 6
481 179.60 wind 1.0 90 > th dose independent rect. 8 7
505 179.75 wind 9.0 10 < th dose independent rect. 9 6
517 179.94 precipitation 0.1 270 < th dose independent rect. 11 9
518 179.94 precipitation 0.1 270 < th dose dependent rect. 11 9
521 179.96 atmosphere 995.0 90 > th dose independent rect. 15 17
527 180.10 precipitation 0.1 270 < th dose independent rect. 10 22
529 180.10 precipitation 0.1 270 < th dose dependent rect. 10 22
537 180.22 precipitation 0.1 10 < th dose independent rect. 15 18
538 180.22 precipitation 0.1 10 < th dose dependent rect. 15 18
555 180.33 temperature 10.0 270 > th dose independent rect. 11 9
556 180.33 atmosphere 1015.0 270 < th dose independent rect. 11 9
557 180.33 temperature 10.0 270 > th dose independent rect. 20 15
558 180.33 atmosphere 995.0 270 > th dose independent rect. 20 15
560 180.34 wind 9.0 270 < th dose independent rect. 20 15
601 180.66 radiation 1.0 270 > th dose independent rect. 9 1
608 180.77 wind 9.0 270 < th dose dependent rect. 6 7
613 180.84 humidity 50.0 270 > th dose independent rect. 20 15
620 180.89 wind 1.0 270 > th dose independent rect. 9 1
650 181.03 temperature 10.0 1440 > th dose independent rect. 10 6
653 181.03 temperature 10.0 1440 > th dose independent rect. 16 18
660 181.08 radiation 10.0 270 < th dose dependent sin 5 NA
665 181.13 temperature 10.0 1440 > th dose independent rect. 4 6
668 181.13 atmosphere 995.0 1440 > th dose independent rect. 4 6
669 181.13 atmosphere 1015.0 1440 < th dose independent rect. 4 6
670 181.13 temperature 10.0 1440 > th dose independent rect. 10 18
676 181.20 atmosphere 995.0 10 > th dose independent rect. 9 18
680 181.21 wind 9.0 270 < th dose dependent rect. 7 5
683 181.24 precipitation 0.1 270 < th dose independent rect. 17 9
684 181.24 precipitation 0.1 270 < th dose dependent rect. 17 9
692 181.34 wind 1.0 270 > th dose independent rect. 2 16
694 181.35 wind 9.0 10 < th dose independent rect. 15 18
697 181.39 wind 1.0 90 > th dose independent rect. 8 5
700 181.39 wind 9.0 270 < th dose independent rect. 2 15
707 181.42 radiation 1.0 270 < th dose independent rect. 2 10
731 181.65 atmosphere 995.0 270 > th dose independent rect. 18 8
755 181.90 precipitation 0.1 270 < th dose independent rect. 20 15
756 181.90 precipitation 0.1 270 < th dose dependent rect. 20 15
784 182.03 atmosphere 995.0 270 > th dose independent rect. 2 15
810 182.19 wind 9.0 270 < th dose dependent rect. 7 18
814 182.23 atmosphere 1015.0 90 < th dose independent rect. 15 17
831 182.42 atmosphere 995.0 10 > th dose independent rect. 15 18
879 182.69 wind 9.0 90 < th dose dependent rect. 3 5
880 182.70 temperature 10.0 270 > th dose dependent rect. 6 6
924 182.96 atmosphere 1015.0 10 < th dose independent rect. 15 18
926 183.00 humidity 50.0 270 > th dose dependent rect. 3 2
980 183.35 temperature 30.0 270 < th dose independent rect. 18 8
983 183.36 humidity 50.0 90 > th dose dependent rect. 3 6