Os03g0589300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ovarian tumour, otubain domain containing protein.
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Os03g0589300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ovarian tumour, otubain domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 193.35 | 0.653 | 6.38 | 3.23 | 1.14 | -0.753 | -1.2 | 6.58 | 0.819 | 19.4 | 0.9358 | 3900 | -- | -- |
| 195.19 | 0.651 | 6.49 | 2.83 | 1.14 | 1.05 | -1.22 | -- | 0.846 | 19.4 | 0.5 | 3847 | -- | -- |
| 188.56 | 0.64 | 6.38 | 3.34 | 1.07 | -1.08 | -- | 7.01 | 0.738 | 19.6 | 0.7336 | 13110 | -- | -- |
| 199.24 | 0.657 | 6.49 | 2.83 | 1.13 | 1.07 | -- | -- | 0.83 | 19.5 | 0.6101 | 3852 | -- | -- |
| 253.91 | 0.742 | 6.26 | 3.63 | -- | -1.8 | -- | 9.56 | 0.783 | -- | 0.5 | 13043 | -- | -- |
| 215 | 0.687 | 6.51 | 3.1 | 1.13 | -- | -1.25 | -- | 0.77 | 19.4 | -- | -- | -- | -- |
| 219.26 | 0.693 | 6.51 | 3.13 | 1.13 | -- | -- | -- | 0.767 | 19.5 | -- | -- | -- | -- |
| 267.64 | 0.762 | 6.47 | 2.8 | -- | 1.05 | -- | -- | 0.815 | -- | 0.8267 | 5032 | -- | -- |
| 303.59 | 0.812 | 6.54 | -- | 1.13 | 1.85 | -- | -- | 0.712 | 19.4 | 1 | 38575 | -- | -- |
| 287.57 | 0.792 | 6.48 | 3.11 | -- | -- | -- | -- | 0.75 | -- | -- | -- | -- | -- |
| 477.38 | 1.02 | 6.59 | -- | 1.1 | -- | -- | -- | 0.419 | 19.7 | -- | -- | -- | -- |
| 366.4 | 0.892 | 6.46 | -- | -- | 1.9 | -- | -- | 0.816 | -- | 1.102 | 38937 | -- | -- |
| 543.14 | 1.09 | 6.56 | -- | -- | -- | -- | -- | 0.404 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 181.02 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 2 | 181.29 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 3 | 181.29 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 4 | 181.29 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 5 | 182.04 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 6 | 182.19 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 7 | 182.19 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 3 |
| 11 | 182.53 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 3 |
| 13 | 182.97 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 20 |
| 18 | 183.21 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 19 | 183.29 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 20 |
| 23 | 183.40 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 28 | 183.57 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 12 |
| 30 | 183.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 6 |
| 38 | 183.69 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 16 |
| 50 | 183.83 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 8 |
| 51 | 183.83 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 8 |
| 58 | 183.89 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 8 |
| 80 | 184.06 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 9 |
| 92 | 184.15 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 95 | 184.17 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 20 | NA |
| 129 | 184.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 22 |
| 136 | 184.46 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 21 |
| 137 | 184.47 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 23 |
| 147 | 184.52 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 23 |
| 156 | 184.58 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 175 | 184.72 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 10 | 12 |
| 177 | 184.72 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 10 | 12 |
| 181 | 184.76 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 185 | 184.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 6 |
| 188 | 184.78 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 12 |
| 197 | 184.85 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 199 | 184.85 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 6 |
| 202 | 184.89 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 16 |
| 234 | 185.12 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 19 |
| 244 | 185.16 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 19 |
| 246 | 185.16 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 19 |
| 292 | 185.42 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 296 | 185.43 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 20 | NA |
| 299 | 185.43 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 20 | NA |
| 303 | 185.44 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 307 | 185.45 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 20 | NA |
| 339 | 185.62 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 426 | 185.97 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 501 | 186.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 10 | 20 |
| 504 | 186.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 10 | 20 |
| 511 | 186.33 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 20 |
| 595 | 186.81 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 16 |
| 615 | 186.86 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 16 |
| 616 | 186.86 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 16 |
| 624 | 186.94 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 658 | 187.07 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 792 | 187.62 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 23 |
| 794 | 187.63 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 23 |
| 795 | 187.63 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 23 |
| 808 | 187.71 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 837 | 187.85 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 839 | 187.86 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 841 | 187.86 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 23 |
| 859 | 187.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 21 |
| 892 | 188.01 | precipitation | 0.1 | 14400 | > th | dose independent | no | NA | NA |
| 893 | 188.01 | precipitation | 0.1 | 14400 | < th | dose independent | no | NA | NA |
| 895 | 188.01 | precipitation | 0.1 | 14400 | < th | dose dependent | no | NA | NA |
| 979 | 188.45 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 13 | 4 |