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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0587200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Kinesin, motor region domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.68 (0.054) R2 : 0.345
β1 : -4.15 (0.376) R2dD : 1.38 R2D : -1.26
β2 : -- (--) R2dC : -- R2C : --
β3 : 3.33 (0.254) R2dE : 0.843 R2E : -0.449
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -20 (1.84) R2dD*E : 1.47 R2D*E : -1.39
γ1 : -0.279 (0.11) R2dN8 : 0.0241 R2N8 : -0.18
σ : 0.7
deviance : 226.17
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_____
C
peak time of C : --
E
wheather : temperature
threshold : 24.15
memory length : 4490
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 7.28
open length of G : 0.746

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
219.73 0.696 3.67 -4.16 0.402 3.19 0.394 -19.4 -0.297 7.47 24.18 4459 7.03 1.53
279.2 0.778 3.41 -2.55 0.589 2.43 0.157 -- -0.353 6.35 8.068 41443 5.7 1.47
219.12 0.689 3.67 -4.19 0.397 3.27 -- -19.9 -0.303 7.38 24.08 4489 7.02 1.17
268.31 0.763 3.37 -1.93 0.517 1.82 -- -- -0.1 7.37 -14.94 47520 5.17 0.0167
226.17 0.7 3.68 -4.15 -- 3.33 -- -20 -0.279 -- 24.15 4490 7.28 0.746
298.79 0.81 3.22 -0.172 0.533 -- 0.00382 -- 0.588 7.59 -- -- -- --
298.79 0.809 3.22 -0.172 0.533 -- -- -- 0.588 7.59 -- -- -- --
274.28 0.771 3.37 -1.97 -- 1.92 -- -- -0.109 -- -43.37 37828 5.16 0.0105
294.34 0.803 3.22 -- 0.494 1.5 -- -- 0.622 7.78 -13.1 47520 5.43 0.283
314.02 0.828 3.24 -0.165 -- -- -- -- 0.597 -- -- -- -- --
299.57 0.81 3.22 -- 0.531 -- -- -- 0.608 7.61 -- -- -- --
302.89 0.811 3.29 -- -- 0.673 -- -- 0.425 -- -30.63 37833 4.13 0.367
314.74 0.828 3.23 -- -- -- -- -- 0.615 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 238.63 temperature 25 4320 > th dose dependent rect. 9 1
2 239.87 temperature 25 4320 > th dose dependent rect. 7 3
15 241.72 temperature 25 4320 < th dose independent rect. 7 3
17 241.89 temperature 30 14400 < th dose independent rect. 12 3
18 242.00 temperature 30 14400 < th dose independent rect. 12 6
20 242.04 temperature 30 14400 > th dose independent rect. 12 3
23 242.05 temperature 30 14400 < th dose independent rect. 12 10
24 242.05 temperature 30 14400 < th dose independent rect. 12 16
35 242.09 temperature 25 4320 > th dose independent rect. 9 1
37 242.12 temperature 25 4320 > th dose independent rect. 7 3
40 242.16 temperature 30 14400 > th dose independent rect. 12 6
75 242.37 temperature 30 14400 > th dose independent rect. 12 1
93 242.49 temperature 30 14400 < th dose independent rect. 12 1
130 242.64 temperature 25 14400 > th dose dependent rect. 15 15
131 242.66 temperature 30 14400 < th dose independent sin 15 NA
165 242.79 temperature 25 43200 > th dose independent rect. 7 3
170 242.81 temperature 25 43200 < th dose independent rect. 7 3
172 242.81 temperature 25 14400 > th dose dependent rect. 16 9
180 242.83 temperature 25 43200 > th dose independent rect. 6 5
198 242.86 temperature 25 43200 < th dose independent rect. 6 5
203 242.90 temperature 25 14400 > th dose dependent sin 14 NA
205 242.94 temperature 30 14400 > th dose independent sin 15 NA
213 243.00 temperature 25 43200 > th dose dependent rect. 11 1
227 243.07 temperature 25 14400 > th dose dependent rect. 16 5
239 243.14 temperature 25 14400 > th dose dependent rect. 17 3
306 243.31 temperature 25 43200 > th dose dependent sin 1 NA
386 243.43 temperature 25 43200 > th dose dependent rect. 16 1
395 243.45 temperature 20 43200 > th dose dependent rect. 5 1
645 243.72 temperature 25 43200 > th dose dependent no NA NA
707 243.86 temperature 25 43200 > th dose dependent rect. 14 23
774 244.00 temperature 25 43200 > th dose independent sin 6 NA
792 244.04 temperature 25 43200 > th dose independent rect. 17 20
815 244.09 temperature 25 43200 < th dose independent rect. 17 19
830 244.13 temperature 25 43200 < th dose independent sin 6 NA
851 244.19 temperature 25 43200 < th dose independent rect. 18 1
879 244.24 temperature 25 4320 > th dose dependent sin 6 NA
904 244.30 temperature 25 43200 > th dose independent rect. 18 1
943 244.36 humidity 90 43200 > th dose dependent rect. 13 12
994 244.48 temperature 30 14400 < th dose independent rect. 6 12