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Os03g0586400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.23 (0.0258) R2 : 0.923
β1 : -- (--) R2dD : -- R2D : --
β2 : 7 (0.116) R2dC : 1.9 R2C : 0.572
β3 : -2.57 (0.0995) R2dE : 0.348 R2E : -0.979
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.119 (0.0549) R2dN8 : 0.00114 R2N8 : 0.00254
σ : 0.485
deviance : 108.27
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_____
C
peak time of C : 16.3
E
wheather : temperature
threshold : 19.34
memory length : 308
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 3.88
open length of G : 15.9

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
103.22 0.477 9.25 -0.246 7.22 -2.76 1.23 -1.69 -0.162 16.2 19.36 300 3.96 15.9
107.31 0.482 9.24 -0.139 6.95 -2.54 -0.438 -- -0.113 16.3 19.39 304 3.92 16
104.37 0.476 9.25 -0.212 7.13 -2.7 -- -0.943 -0.142 16.2 19.38 308 3.88 15.9
107.77 0.484 9.23 -0.156 6.96 -2.53 -- -- -0.131 16.3 19.34 306 3.9 15.9
1335.59 1.7 9.23 -0.191 -- -1.93 -- -0.466 -0.405 -- 19.2 1393 3.67 16.5
194.63 0.654 9.29 -0.594 4.73 -- -1.07 -- -0.384 17.1 -- -- -- --
197.52 0.658 9.29 -0.595 4.72 -- -- -- -0.389 17.1 -- -- -- --
1169.24 1.6 9.25 -0.884 -- 1.39 -- -- -0.576 -- 19.4 1302 5.53 16.7
108.27 0.485 9.23 -- 7 -2.57 -- -- -0.119 16.3 19.34 308 3.88 15.9
1367.59 1.73 9.24 -0.764 -- -- -- -- -0.509 -- -- -- -- --
206.85 0.673 9.27 -- 4.73 -- -- -- -0.322 17.1 -- -- -- --
215.7 0.684 9.2 -- -- 4.54 -- -- -0.349 -- -4.095 2096 3.77 16
1382.99 1.74 9.22 -- -- -- -- -- -0.424 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 111.00 temperature 10.0 270 > th dose dependent rect. 2 8
2 111.63 temperature 20.0 270 > th dose independent rect. 4 16
9 116.75 temperature 20.0 270 > th dose independent rect. 3 6
17 122.45 radiation 40.0 270 < th dose dependent rect. 15 18
20 122.69 radiation 20.0 270 < th dose independent rect. 15 18
75 132.33 radiation 30.0 270 < th dose independent rect. 14 7
80 132.49 temperature 10.0 270 > th dose independent rect. 8 8
81 132.49 atmosphere 1015.0 270 < th dose independent rect. 8 8
82 132.49 temperature 10.0 270 > th dose independent rect. 16 16
83 132.68 temperature 10.0 270 > th dose independent rect. 9 6
84 132.68 atmosphere 1015.0 270 < th dose independent rect. 9 6
85 132.68 temperature 10.0 270 > th dose independent rect. 15 18
86 132.85 atmosphere 995.0 270 > th dose independent rect. 9 6
88 132.95 precipitation 0.1 270 < th dose independent rect. 8 8
90 132.95 precipitation 0.1 270 < th dose dependent rect. 8 8
91 132.96 wind 1.0 270 > th dose independent rect. 9 6
92 133.12 precipitation 0.1 270 < th dose independent rect. 9 6
93 133.12 precipitation 0.1 270 < th dose dependent rect. 9 6
95 133.22 wind 1.0 270 > th dose independent rect. 8 8
96 133.27 temperature 15.0 270 > th dose independent rect. 15 6
99 133.52 atmosphere 995.0 270 > th dose independent rect. 16 16
103 133.62 precipitation 0.1 270 < th dose independent rect. 20 8
104 133.62 precipitation 0.1 270 < th dose dependent rect. 20 8
105 133.71 atmosphere 995.0 270 > th dose independent rect. 8 8
106 133.82 wind 7.0 270 < th dose independent rect. 20 8
111 134.21 wind 9.0 270 < th dose independent rect. 8 8
112 134.21 temperature 10.0 270 > th dose independent rect. 20 8
113 134.21 temperature 30.0 270 < th dose independent rect. 20 8
114 134.21 humidity 50.0 270 > th dose independent rect. 20 8
117 134.21 atmosphere 995.0 270 > th dose independent rect. 20 8
118 134.21 radiation 1.0 270 < th dose independent rect. 20 8
124 134.21 atmosphere 1015.0 270 < th dose independent rect. 4 16
125 134.21 radiation 1.0 270 < th dose dependent rect. 20 8
130 134.27 wind 9.0 270 < th dose independent rect. 16 16
135 134.62 wind 9.0 270 < th dose independent rect. 9 6
138 134.71 radiation 1.0 270 < th dose dependent rect. 20 15
140 134.75 atmosphere 995.0 270 > th dose independent rect. 15 18
144 134.82 wind 9.0 270 < th dose independent rect. 15 18
153 135.17 humidity 50.0 270 > th dose independent rect. 9 6
154 135.20 humidity 70.0 270 > th dose independent rect. 2 7
158 135.33 precipitation 0.1 270 < th dose independent rect. 21 18
159 135.33 precipitation 0.1 270 < th dose dependent rect. 21 18
163 135.48 precipitation 0.1 270 < th dose independent rect. 10 16
165 135.48 precipitation 0.1 270 < th dose dependent rect. 10 16
168 135.53 wind 9.0 270 < th dose independent rect. 4 16
171 135.74 temperature 15.0 90 > th dose independent rect. 17 18
173 135.76 radiation 40.0 30 < th dose independent rect. 17 18
175 135.79 temperature 10.0 270 > th dose independent rect. 21 18
176 135.79 atmosphere 995.0 270 > th dose independent rect. 21 18
183 135.86 radiation 40.0 270 < th dose dependent rect. 14 6
184 135.90 atmosphere 995.0 270 > th dose dependent rect. 9 6
193 136.59 wind 7.0 270 < th dose independent rect. 2 8
194 136.59 humidity 50.0 270 > th dose independent rect. 16 16
206 136.82 radiation 30.0 270 < th dose independent rect. 2 7
226 137.17 wind 9.0 270 < th dose independent rect. 10 16
229 137.34 atmosphere 995.0 270 > th dose independent rect. 2 8
230 137.34 atmosphere 1015.0 270 < th dose independent rect. 2 8
231 137.34 temperature 10.0 270 > th dose independent rect. 10 16
233 137.36 wind 1.0 270 > th dose independent rect. 15 6
238 137.44 precipitation 0.1 270 < th dose independent rect. 15 18
239 137.44 precipitation 0.1 270 < th dose dependent rect. 15 18
244 137.56 atmosphere 995.0 270 > th dose independent rect. 15 6
249 137.73 atmosphere 1015.0 270 < th dose independent rect. 15 6
254 137.81 humidity 50.0 270 > th dose independent rect. 21 18
257 137.90 wind 9.0 270 < th dose independent rect. 14 7
258 137.91 radiation 1.0 270 > th dose independent rect. 9 6
261 137.94 wind 9.0 270 < th dose independent rect. 21 18
273 138.13 precipitation 0.1 270 < th dose independent rect. 16 16
274 138.13 precipitation 0.1 270 < th dose dependent rect. 16 16
292 138.49 precipitation 0.1 270 < th dose independent rect. 15 6
293 138.49 precipitation 0.1 270 < th dose dependent rect. 15 6
299 138.57 atmosphere 1015.0 270 < th dose independent rect. 21 17
300 138.59 humidity 50.0 270 > th dose independent rect. 15 18
301 138.60 precipitation 0.1 270 < th dose independent rect. 4 16
302 138.60 humidity 50.0 270 > th dose dependent rect. 3 7
303 138.60 precipitation 0.1 270 < th dose dependent rect. 4 16
347 139.06 humidity 60.0 90 > th dose independent rect. 17 18
353 139.14 precipitation 0.1 270 < th dose independent rect. 2 8
354 139.14 precipitation 0.1 270 < th dose dependent rect. 2 8
357 139.22 temperature 30.0 270 < th dose independent rect. 2 7
398 139.79 atmosphere 995.0 270 > th dose independent rect. 4 16
417 140.19 atmosphere 995.0 90 > th dose dependent rect. 11 6
438 140.64 wind 9.0 270 < th dose dependent rect. 20 7
449 140.94 radiation 1.0 270 < th dose dependent rect. 20 11
456 141.03 radiation 40.0 270 < th dose dependent rect. 3 17
471 141.30 temperature 10.0 270 > th dose dependent rect. 16 17
474 141.36 humidity 50.0 270 > th dose independent rect. 14 7
487 141.44 humidity 50.0 270 > th dose dependent rect. 20 7
510 141.78 temperature 10.0 270 > th dose dependent rect. 20 7
528 141.87 atmosphere 995.0 30 > th dose independent rect. 17 18
557 142.10 atmosphere 995.0 30 > th dose independent rect. 11 6
560 142.11 temperature 10.0 30 > th dose independent rect. 11 6
562 142.11 atmosphere 1015.0 30 < th dose independent rect. 11 6
565 142.12 precipitation 0.1 30 < th dose independent rect. 11 6
566 142.12 precipitation 0.1 30 < th dose dependent rect. 11 6
567 142.13 radiation 10.0 270 < th dose independent rect. 4 16
578 142.23 radiation 10.0 270 < th dose dependent rect. 4 16
586 142.34 radiation 40.0 270 < th dose independent rect. 3 17
589 142.38 radiation 40.0 270 < th dose dependent rect. 3 6
594 142.44 temperature 30.0 30 < th dose independent rect. 17 18
605 142.54 wind 1.0 30 > th dose independent rect. 11 6
610 142.59 wind 9.0 30 < th dose independent rect. 17 18
640 142.87 temperature 10.0 90 > th dose dependent rect. 5 17
646 143.01 temperature 10.0 1440 > th dose independent rect. 12 6
650 143.01 temperature 10.0 1440 > th dose independent rect. 18 18
688 143.34 wind 9.0 270 < th dose dependent rect. 2 8
715 143.60 atmosphere 1015.0 270 < th dose independent rect. 20 8
736 143.67 humidity 80.0 270 > th dose independent rect. 4 4
772 144.18 wind 9.0 30 < th dose independent rect. 11 6
781 144.25 radiation 1.0 90 > th dose independent rect. 11 6
784 144.27 precipitation 0.1 30 < th dose independent rect. 17 18
785 144.27 precipitation 0.1 30 < th dose dependent rect. 17 18
808 144.41 radiation 10.0 30 < th dose dependent rect. 6 16
826 144.59 wind 9.0 270 < th dose dependent rect. 3 6
830 144.63 radiation 40.0 10 < th dose dependent rect. 17 18
847 144.84 wind 1.0 270 > th dose independent rect. 20 8
921 145.29 atmosphere 995.0 270 > th dose dependent rect. 11 2
930 145.38 humidity 50.0 30 > th dose independent rect. 11 6
941 145.48 wind 1.0 270 > th dose independent rect. 15 17
987 145.92 radiation 40.0 30 < th dose independent rect. 19 16
990 145.95 wind 1.0 270 > th dose independent rect. 21 18