Os03g0579000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase M50, putative membrane-associated zinc metallopeptidase family protein.
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Os03g0579000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase M50, putative membrane-associated zinc metallopeptidase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.73 | 0.321 | 13.6 | 1.22 | 0.296 | -0.0719 | -0.894 | 1.74 | 0.169 | 0.0889 | 19.78 | 2757 | -- | -- |
| 50.68 | 0.332 | 13.6 | 1.04 | 0.311 | -0.368 | -0.63 | -- | 0.19 | 0.106 | 19.8 | 21554 | -- | -- |
| 49.67 | 0.328 | 13.6 | 1.29 | 0.301 | -0.0776 | -- | 1.77 | 0.176 | 0.85 | 19.7 | 2969 | -- | -- |
| 50.76 | 0.332 | 13.6 | 1.37 | 0.304 | -0.733 | -- | -- | 0.184 | 0.913 | 17 | 21772 | -- | -- |
| 55.19 | 0.346 | 13.5 | 1.26 | -- | -0.0918 | -- | 1.78 | 0.176 | -- | 19.5 | 2997 | -- | -- |
| 54.34 | 0.346 | 13.6 | 0.745 | 0.282 | -- | -0.872 | -- | 0.0185 | 23.7 | -- | -- | -- | -- |
| 57.28 | 0.354 | 13.6 | 0.777 | 0.297 | -- | -- | -- | 0.0203 | 0.835 | -- | -- | -- | -- |
| 56.43 | 0.35 | 13.6 | 1.38 | -- | -0.733 | -- | -- | 0.202 | -- | 17.1 | 21806 | -- | -- |
| 72.91 | 0.398 | 13.7 | -- | 0.281 | 0.115 | -- | -- | -0.11 | 0.373 | 24.3 | 1169 | -- | -- |
| 62.79 | 0.37 | 13.6 | 0.788 | -- | -- | -- | -- | 0.0258 | -- | -- | -- | -- | -- |
| 73.19 | 0.4 | 13.6 | -- | 0.31 | -- | -- | -- | -0.0663 | 0.947 | -- | -- | -- | -- |
| 69.94 | 0.39 | 13.7 | -- | -- | 0.445 | -- | -- | -0.214 | -- | 21.71 | 47520 | -- | -- |
| 79.17 | 0.415 | 13.6 | -- | -- | -- | -- | -- | -0.0616 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.66 | radiation | 30 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 3 | 44.72 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 4 | 44.78 | radiation | 30 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 13 | 45.04 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 9 |
| 14 | 45.05 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 20 | 45.10 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 23 | 45.14 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 11 |
| 30 | 45.20 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 17 |
| 31 | 45.22 | humidity | 90 | 14400 | > th | dose dependent | sin | 4 | NA |
| 34 | 45.23 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 14 |
| 81 | 45.36 | humidity | 90 | 14400 | > th | dose independent | rect. | 2 | 7 |
| 97 | 45.40 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 103 | 45.41 | humidity | 90 | 14400 | > th | dose independent | sin | 7 | NA |
| 115 | 45.43 | humidity | 90 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 142 | 45.49 | humidity | 90 | 14400 | < th | dose independent | sin | 7 | NA |
| 149 | 45.51 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 163 | 45.55 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 168 | 45.56 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 274 | 45.76 | humidity | 90 | 14400 | > th | dose dependent | rect. | 13 | 20 |
| 346 | 45.85 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 424 | 45.91 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 504 | 46.01 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 508 | 46.02 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 23 |
| 559 | 46.10 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 567 | 46.11 | humidity | 90 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 568 | 46.11 | humidity | 90 | 14400 | > th | dose independent | rect. | 14 | 14 |
| 602 | 46.15 | wind | 9 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 617 | 46.17 | humidity | 90 | 14400 | > th | dose independent | no | NA | NA |
| 648 | 46.20 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 23 |
| 670 | 46.23 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 697 | 46.27 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 707 | 46.28 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 9 |
| 716 | 46.29 | humidity | 90 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 787 | 46.38 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 6 |
| 846 | 46.45 | humidity | 90 | 14400 | < th | dose independent | no | NA | NA |
| 853 | 46.45 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 23 |
| 882 | 46.49 | wind | 7 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 887 | 46.50 | humidity | 90 | 14400 | < th | dose independent | rect. | 16 | 12 |
| 964 | 46.58 | humidity | 90 | 14400 | < th | dose independent | rect. | 3 | 23 |