Os03g0578300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0578300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 135.17 | 0.546 | 6.35 | -0.205 | 0.128 | 3.32 | -1.08 | -2.77 | -0.0557 | 21.6 | 28.52 | 97 | -- | -- |
| 142.55 | 0.556 | 6.4 | -0.672 | 0.148 | 3.39 | -1.58 | -- | -0.153 | 23.3 | 27.76 | 111 | -- | -- |
| 139.29 | 0.55 | 6.35 | -0.13 | 0.144 | 3.28 | -- | -3.08 | -0.0669 | 22.1 | 28.57 | 96 | -- | -- |
| 152.92 | 0.576 | 6.4 | -0.631 | 0.182 | 3.38 | -- | -- | -0.161 | 22.4 | 27.73 | 118 | -- | -- |
| 139.58 | 0.55 | 6.36 | -0.197 | -- | 3.35 | -- | -3.05 | -0.0579 | -- | 28.65 | 76 | -- | -- |
| 305.67 | 0.82 | 6.57 | -1.52 | 1.05 | -- | -1.19 | -- | -0.893 | 2.22 | -- | -- | -- | -- |
| 310.74 | 0.825 | 6.56 | -1.49 | 1.05 | -- | -- | -- | -0.887 | 2.42 | -- | -- | -- | -- |
| 154.32 | 0.579 | 6.39 | -0.617 | -- | 3.44 | -- | -- | -0.148 | -- | 27.85 | 97 | -- | -- |
| 162.22 | 0.593 | 6.37 | -- | 0.175 | 3.67 | -- | -- | -0.0329 | 20.3 | 27.77 | 118 | -- | -- |
| 376.16 | 0.906 | 6.55 | -1.44 | -- | -- | -- | -- | -0.861 | -- | -- | -- | -- | -- |
| 368.95 | 0.899 | 6.52 | -- | 1.02 | -- | -- | -- | -0.721 | 2.4 | -- | -- | -- | -- |
| 163.55 | 0.596 | 6.37 | -- | -- | 3.65 | -- | -- | -0.0429 | -- | 27.72 | 107 | -- | -- |
| 430.98 | 0.969 | 6.52 | -- | -- | -- | -- | -- | -0.701 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 123.65 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 3 | 126.96 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 5 | 132.76 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 9 | 135.33 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 10 | 136.46 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 15 | 138.14 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 16 | 138.27 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 22 | 140.20 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 23 | 140.35 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 24 | 140.40 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 27 | 140.58 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 30 | 141.12 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 36 | 141.64 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 41 | 142.58 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 58 | 145.20 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 80 | 148.31 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 90 | 149.74 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 138 | 154.75 | temperature | 20 | 30 | > th | dose dependent | rect. | 2 | 23 |
| 149 | 155.49 | temperature | 20 | 90 | > th | dose dependent | rect. | 24 | 23 |
| 156 | 155.99 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 20 |
| 213 | 158.37 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 288 | 159.89 | temperature | 20 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 335 | 161.14 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 339 | 161.26 | temperature | 15 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 340 | 161.28 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 5 |
| 365 | 161.85 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 21 |
| 384 | 162.24 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 385 | 162.27 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 387 | 162.31 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 2 |
| 434 | 163.23 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 446 | 163.32 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 504 | 164.10 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 23 |
| 511 | 164.19 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 6 |
| 529 | 164.40 | temperature | 25 | 720 | < th | dose independent | rect. | 7 | 17 |
| 551 | 164.57 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 6 |
| 586 | 164.89 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 19 |
| 725 | 165.72 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 730 | 165.74 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 811 | 166.14 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 821 | 166.17 | temperature | 10 | 1440 | > th | dose dependent | sin | 4 | NA |