Os03g0577300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0577300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106.28 | 0.484 | 6.16 | 0.111 | 0.299 | -0.701 | -0.998 | 0.414 | 0.0497 | 17.9 | 22.5 | 643 | -- | -- |
| 106.94 | 0.482 | 6.17 | 0.00498 | 0.265 | -0.707 | -0.843 | -- | 0.0221 | 17.9 | 22.48 | 740 | -- | -- |
| 108.51 | 0.485 | 6.16 | 0.0551 | 0.275 | -0.691 | -- | 0.217 | 0.0355 | 17.7 | 22.5 | 661 | -- | -- |
| 108.26 | 0.485 | 6.17 | -0.00628 | 0.307 | -0.728 | -- | -- | 0.00422 | 17.7 | 22.1 | 634 | -- | -- |
| 111.6 | 0.492 | 6.15 | 0.0444 | -- | -0.729 | -- | 0.152 | 0.0399 | -- | 22.3 | 1100 | -- | -- |
| 130.8 | 0.536 | 6.22 | -0.245 | 0.231 | -- | -0.713 | -- | -0.23 | 16.8 | -- | -- | -- | -- |
| 132 | 0.538 | 6.22 | -0.247 | 0.228 | -- | -- | -- | -0.233 | 16 | -- | -- | -- | -- |
| 111.61 | 0.492 | 6.17 | 0.00529 | -- | -0.745 | -- | -- | 0.0139 | -- | 22.24 | 1103 | -- | -- |
| 108.19 | 0.484 | 6.18 | -- | 0.312 | -0.733 | -- | -- | 0.000355 | 17.7 | 22 | 622 | -- | -- |
| 134.83 | 0.543 | 6.22 | -0.256 | -- | -- | -- | -- | -0.239 | -- | -- | -- | -- | -- |
| 133.61 | 0.541 | 6.22 | -- | 0.233 | -- | -- | -- | -0.206 | 16 | -- | -- | -- | -- |
| 111.61 | 0.492 | 6.17 | -- | -- | -0.744 | -- | -- | 0.0131 | -- | 22.24 | 1103 | -- | -- |
| 136.57 | 0.545 | 6.22 | -- | -- | -- | -- | -- | -0.211 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 107.64 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 17 |
| 5 | 107.75 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 14 |
| 13 | 107.94 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 17 | 107.99 | temperature | 25 | 270 | < th | dose dependent | rect. | 22 | 22 |
| 38 | 108.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 61 | 108.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 8 |
| 88 | 109.14 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 94 | 109.22 | temperature | 15 | 720 | > th | dose dependent | sin | 11 | NA |
| 103 | 109.27 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 106 | 109.28 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 132 | 109.39 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 148 | 109.47 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 194 | 109.77 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 208 | 109.87 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 290 | 110.23 | temperature | 10 | 270 | > th | dose dependent | sin | 8 | NA |
| 506 | 110.86 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 797 | 111.48 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 963 | 111.77 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |