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Os03g0576500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.18 (0.025) R2 : 0.51
β1 : 0.838 (0.0916) R2dD : 0.0933 R2D : -0.0493
β2 : 0.908 (0.0593) R2dC : 0.253 R2C : 0.173
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.771 (0.0534) R2dN8 : 0.3 R2N8 : 0.17
σ : 0.471
deviance : 100.95
__
_____
C
peak time of C : 12
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
86.53 0.437 6.23 0.499 0.667 1.15 0.716 -0.56 0.579 10.7 15.3 10 -- --
86.61 0.437 6.22 0.584 0.661 1.15 0.6 -- 0.601 10.7 15.3 10 -- --
88.02 0.44 6.22 0.638 0.662 1.12 -- 0.167 0.614 10.9 15.3 10 -- --
88.04 0.44 6.22 0.615 0.661 1.12 -- -- 0.608 10.9 15.3 10 -- --
110.89 0.493 6.25 0.519 -- 1.65 -- 0.119 0.535 -- 15.3 10 -- --
99.74 0.468 6.18 0.816 0.91 -- 0.533 -- 0.768 11.9 -- -- -- --
100.95 0.471 6.18 0.838 0.908 -- -- -- 0.771 12 -- -- -- --
110.9 0.493 6.25 0.502 -- 1.65 -- -- 0.53 -- 15.3 10 -- --
97.08 0.461 6.24 -- 0.608 1.41 -- -- 0.504 10.4 15.3 10 -- --
152.91 0.578 6.2 0.81 -- -- -- -- 0.759 -- -- -- -- --
119.47 0.511 6.2 -- 0.898 -- -- -- 0.678 11.9 -- -- -- --
117.17 0.506 6.27 -- -- 1.8 -- -- 0.456 -- 15.3 10 -- --
170.22 0.609 6.22 -- -- -- -- -- 0.669 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 80.07 temperature 30 270 < th dose dependent rect. 22 14
2 80.19 temperature 10 10 > th dose dependent sin 5 NA
11 80.81 temperature 30 10 < th dose dependent sin 5 NA
17 80.95 temperature 30 90 < th dose dependent sin 6 NA
95 83.30 temperature 25 90 < th dose dependent rect. 1 11
98 83.32 temperature 25 10 < th dose dependent rect. 24 13
151 84.08 temperature 30 10 < th dose dependent rect. 22 15
188 84.43 temperature 30 90 < th dose dependent rect. 21 22
192 84.49 temperature 30 10 < th dose dependent rect. 20 23
282 85.30 temperature 30 720 < th dose dependent rect. 21 7
307 85.43 temperature 30 10 < th dose dependent rect. 16 21
375 85.77 temperature 20 270 > th dose dependent rect. 21 14
428 86.01 temperature 25 720 < th dose dependent rect. 23 5
443 86.06 temperature 30 10 < th dose dependent rect. 14 23
532 86.40 temperature 10 720 > th dose dependent rect. 19 12
572 86.53 temperature 30 10 < th dose dependent rect. 7 23
575 86.54 temperature 10 720 > th dose dependent rect. 19 15
577 86.55 temperature 15 10 > th dose dependent no NA NA
581 86.57 temperature 30 10 < th dose dependent rect. 1 23
582 86.57 temperature 30 10 < th dose dependent rect. 11 23
628 86.71 temperature 30 10 < th dose dependent no NA NA
633 86.72 temperature 15 270 > th dose dependent rect. 17 22
635 86.72 temperature 15 10 > th dose dependent rect. 9 23
695 86.87 temperature 15 270 > th dose dependent rect. 1 12
701 86.88 temperature 10 720 > th dose dependent rect. 22 9
718 86.93 temperature 25 720 < th dose dependent rect. 1 1
774 87.08 temperature 15 90 > th dose dependent rect. 19 23
793 87.13 temperature 15 90 > th dose dependent rect. 3 23
814 87.19 temperature 30 10 < th dose dependent rect. 23 23
864 87.33 temperature 20 10 < th dose independent rect. 24 13
979 87.62 temperature 20 10 > th dose dependent rect. 24 16
988 87.64 temperature 20 10 > th dose dependent rect. 20 20