Os03g0575200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Potassium transporter 1 (OsHAK1).
FiT-DB / Search/ Help/ Sample detail
|
Os03g0575200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Potassium transporter 1 (OsHAK1).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.24 | 0.385 | 10.1 | 0.35 | 1 | 0.58 | 1.26 | -0.97 | 0.228 | 7.65 | 4.835 | 280 | -- | -- |
| 69.06 | 0.387 | 10.1 | 0.345 | 1.01 | 0.926 | 1.69 | -- | 0.236 | 9.38 | 4.944 | 284 | -- | -- |
| 70.75 | 0.392 | 10.1 | 0.368 | 1.1 | 0.52 | -- | -1.14 | 0.211 | 7.37 | 6.757 | 204 | -- | -- |
| 77.78 | 0.411 | 10.1 | 0.357 | 1.08 | 0.505 | -- | -- | 0.219 | 7.33 | 8.42 | 216 | -- | -- |
| 83.11 | 0.425 | 10.1 | 0.728 | -- | 1.36 | -- | -0.985 | 0.33 | -- | 0.3411 | 678 | -- | -- |
| 79.22 | 0.417 | 10.1 | 0.345 | 1.26 | -- | 0.569 | -- | 0.204 | 5.69 | -- | -- | -- | -- |
| 79.88 | 0.419 | 10.1 | 0.347 | 1.26 | -- | -- | -- | 0.201 | 5.55 | -- | -- | -- | -- |
| 78.96 | 0.414 | 10.1 | 0.538 | -- | 1.44 | -- | -- | 0.289 | -- | 0.3029 | 685 | -- | -- |
| 81.09 | 0.419 | 10.1 | -- | 1.1 | 0.435 | -- | -- | 0.177 | 7.02 | 9.92 | 204 | -- | -- |
| 162.48 | 0.596 | 10.1 | 0.388 | -- | -- | -- | -- | 0.232 | -- | -- | -- | -- | -- |
| 83.04 | 0.426 | 10.1 | -- | 1.27 | -- | -- | -- | 0.163 | 5.54 | -- | -- | -- | -- |
| 84.9 | 0.429 | 10.1 | -- | -- | 1.45 | -- | -- | 0.21 | -- | 0.49 | 685 | -- | -- |
| 166.45 | 0.602 | 10.1 | -- | -- | -- | -- | -- | 0.189 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.29 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 16 |
| 119 | 61.25 | temperature | 25.0 | 90 | < th | dose independent | rect. | 16 | 17 |
| 148 | 61.76 | temperature | 30.0 | 90 | < th | dose dependent | sin | 12 | NA |
| 178 | 62.23 | temperature | 10.0 | 10 | > th | dose dependent | sin | 12 | NA |
| 246 | 62.65 | temperature | 20.0 | 720 | > th | dose independent | rect. | 13 | 10 |
| 380 | 63.65 | temperature | 20.0 | 270 | > th | dose independent | sin | 17 | NA |
| 440 | 63.95 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 16 | 5 |
| 456 | 64.01 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 460 | 64.04 | temperature | 20.0 | 720 | > th | dose independent | rect. | 9 | 15 |
| 505 | 64.24 | temperature | 20.0 | 720 | > th | dose independent | sin | 20 | NA |
| 513 | 64.27 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 519 | 64.31 | temperature | 25.0 | 270 | < th | dose independent | sin | 14 | NA |
| 615 | 64.92 | temperature | 25.0 | 720 | < th | dose independent | rect. | 16 | 3 |
| 627 | 65.00 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 16 | 7 |
| 663 | 65.21 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 675 | 65.24 | temperature | 25.0 | 720 | < th | dose independent | rect. | 15 | 7 |
| 794 | 65.78 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 859 | 66.05 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 909 | 66.24 | wind | 3.0 | 720 | > th | dose independent | rect. | 15 | 1 |
| 912 | 66.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 913 | 66.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 928 | 66.30 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 14 |
| 944 | 66.37 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 23 |
| 948 | 66.38 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 13 | 14 |
| 965 | 66.42 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 13 | 11 |
| 991 | 66.54 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 10 |
| 994 | 66.54 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 15 | 12 |