Os03g0574300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0574300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 88.27 | 0.441 | 7.16 | 0.251 | 0.898 | -0.827 | -0.479 | 0.182 | 0.373 | 7.77 | 23.88 | 1457 | -- | -- |
| 88.29 | 0.438 | 7.16 | 0.321 | 0.901 | -0.815 | -0.482 | -- | 0.384 | 7.77 | 23.78 | 1438 | -- | -- |
| 88.9 | 0.439 | 7.16 | 0.226 | 0.902 | -0.826 | -- | 0.209 | 0.371 | 7.68 | 23.9 | 1464 | -- | -- |
| 88.93 | 0.439 | 7.16 | 0.311 | 0.901 | -0.813 | -- | -- | 0.384 | 7.69 | 23.76 | 1436 | -- | -- |
| 132.1 | 0.535 | 7.17 | 0.253 | -- | -0.887 | -- | 0.168 | 0.413 | -- | 24.2 | 1422 | -- | -- |
| 117.55 | 0.508 | 7.07 | 0.652 | 0.918 | -- | -0.397 | -- | 0.749 | 7.56 | -- | -- | -- | -- |
| 117.97 | 0.509 | 7.07 | 0.641 | 0.919 | -- | -- | -- | 0.749 | 7.48 | -- | -- | -- | -- |
| 132.16 | 0.535 | 7.17 | 0.305 | -- | -0.856 | -- | -- | 0.416 | -- | 24 | 1434 | -- | -- |
| 91.27 | 0.445 | 7.16 | -- | 0.91 | -0.861 | -- | -- | 0.347 | 7.68 | 23.9 | 1457 | -- | -- |
| 163.11 | 0.597 | 7.09 | 0.656 | -- | -- | -- | -- | 0.764 | -- | -- | -- | -- | -- |
| 128.81 | 0.531 | 7.09 | -- | 0.925 | -- | -- | -- | 0.678 | 7.43 | -- | -- | -- | -- |
| 134.5 | 0.54 | 7.18 | -- | -- | -0.919 | -- | -- | 0.404 | -- | 24.2 | 1438 | -- | -- |
| 174.44 | 0.616 | 7.11 | -- | -- | -- | -- | -- | 0.691 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.59 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 12 |
| 6 | 88.22 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 12 |
| 27 | 89.05 | temperature | 25 | 1440 | < th | dose independent | sin | 20 | NA |
| 30 | 89.07 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 50 | 89.55 | temperature | 25 | 1440 | > th | dose independent | rect. | 13 | 7 |
| 51 | 89.57 | temperature | 25 | 1440 | > th | dose independent | sin | 20 | NA |
| 82 | 90.00 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 99 | 90.22 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 10 |
| 100 | 90.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 8 |
| 103 | 90.32 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 12 |
| 144 | 90.63 | temperature | 25 | 1440 | < th | dose dependent | sin | 18 | NA |
| 184 | 90.91 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 17 |
| 232 | 91.22 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 238 | 91.26 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 367 | 91.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 373 | 91.84 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 383 | 91.87 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 427 | 92.00 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 456 | 92.07 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 487 | 92.14 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 570 | 92.34 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 614 | 92.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 633 | 92.45 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 634 | 92.45 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 640 | 92.46 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 696 | 92.57 | temperature | 10 | 1440 | > th | dose dependent | sin | 15 | NA |
| 805 | 92.75 | humidity | 60 | 43200 | < th | dose independent | rect. | 22 | 14 |
| 834 | 92.78 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 4 |