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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0573600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.86 (0.0154) R2 : 0.00629
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0553 (0.0325) R2dN8 : 0.00813 R2N8 : 0.00629
σ : 0.291
deviance : 38.83
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
36.79 0.285 2.85 0.121 0.573 0.465 -0.391 -0.564 0.0865 13.5 0.3896 271 -- --
37.36 0.285 2.87 0.0961 0.595 0.461 -0.00808 -- 0.0417 13.5 0.2649 280 -- --
36.82 0.283 2.85 0.109 0.598 0.485 -- -0.234 0.0833 13.5 0.2453 273 -- --
37.1 0.284 2.85 0.103 0.599 0.484 -- -- 0.0803 13.6 0.23 276 -- --
38.06 0.287 2.87 0.000466 -- 0.15 -- 0.238 0.0637 -- 0.1295 1176 -- --
38.12 0.289 2.86 0.0433 0.0825 -- 0.259 -- 0.0605 9.41 -- -- -- --
38.37 0.29 2.86 0.0528 0.0815 -- -- -- 0.0608 9.38 -- -- -- --
38.08 0.287 2.86 0.0764 -- 0.173 -- -- 0.0695 -- 0.07971 1110 -- --
37.38 0.285 2.85 -- 0.607 0.487 -- -- 0.0755 13.5 0.3 273 -- --
38.76 0.291 2.86 0.0523 -- -- -- -- 0.0611 -- -- -- -- --
38.44 0.29 2.86 -- 0.0815 -- -- -- 0.0549 9.34 -- -- -- --
38.24 0.288 2.86 -- -- 0.162 -- -- 0.0635 -- 0.17 1108 -- --
38.83 0.291 2.86 -- -- -- -- -- 0.0553 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.87 radiation 1.0 90 < th dose independent rect. 14 1
2 32.87 radiation 1.0 90 < th dose dependent rect. 14 1
81 35.32 humidity 90.0 270 > th dose independent rect. 11 2
82 35.32 humidity 90.0 270 > th dose dependent rect. 11 2
116 35.58 humidity 80.0 10 < th dose independent rect. 12 1
119 35.61 wind 7.0 30 < th dose dependent rect. 12 1
144 35.71 humidity 90.0 30 < th dose dependent rect. 12 1
146 35.72 temperature 20.0 10 > th dose independent rect. 12 1
147 35.72 radiation 20.0 10 > th dose independent rect. 12 1
158 35.73 atmosphere 995.0 10 > th dose dependent rect. 12 1
159 35.75 atmosphere 1005.0 10 > th dose independent rect. 12 1
161 35.76 wind 5.0 30 < th dose independent rect. 12 1
164 35.78 radiation 1.0 10 > th dose dependent rect. 12 1
165 35.79 wind 7.0 90 > th dose independent rect. 14 1
168 35.80 temperature 30.0 30 < th dose independent rect. 12 1
193 35.86 wind 7.0 90 > th dose dependent rect. 14 1
203 35.89 wind 1.0 10 > th dose independent rect. 12 1
209 35.90 wind 9.0 1440 < th dose independent rect. 23 1
210 35.90 temperature 10.0 1440 > th dose independent rect. 23 1
213 35.90 temperature 30.0 1440 < th dose independent rect. 23 1
217 35.90 humidity 50.0 1440 > th dose independent rect. 23 1
227 35.90 atmosphere 995.0 1440 > th dose independent rect. 23 1
229 35.90 radiation 1.0 1440 < th dose independent rect. 23 1
252 35.90 temperature 10.0 1440 > th dose independent rect. 24 23
255 35.90 radiation 1.0 1440 < th dose dependent rect. 23 1
261 35.91 temperature 25.0 30 > th dose independent rect. 22 1
269 35.93 temperature 10.0 10 > th dose independent rect. 12 1
273 35.93 humidity 80.0 90 > th dose independent rect. 15 1
276 35.93 atmosphere 1015.0 10 < th dose independent rect. 12 1
280 35.93 precipitation 0.1 10 < th dose independent rect. 12 1
285 35.93 temperature 10.0 10 > th dose independent rect. 13 23
289 35.93 precipitation 0.1 10 < th dose dependent rect. 12 1
292 35.94 temperature 20.0 30 > th dose dependent rect. 22 1
294 35.94 atmosphere 1005.0 30 > th dose dependent rect. 22 1
295 35.95 wind 3.0 30 < th dose independent rect. 22 1
298 35.96 humidity 80.0 30 > th dose independent rect. 22 1
303 35.97 humidity 90.0 30 < th dose independent rect. 22 1
304 35.97 atmosphere 1005.0 30 > th dose independent rect. 22 1
309 35.98 wind 5.0 30 < th dose dependent rect. 22 1
310 35.98 temperature 10.0 10 > th dose dependent rect. 12 1
313 35.99 radiation 40.0 10 > th dose independent rect. 12 1
321 36.00 precipitation 0.1 30 < th dose independent rect. 22 1
323 36.00 precipitation 0.1 30 < th dose dependent rect. 22 1
328 36.01 temperature 10.0 30 > th dose independent rect. 22 1
330 36.01 temperature 30.0 30 < th dose independent rect. 22 1
331 36.01 humidity 50.0 30 > th dose independent rect. 22 1
335 36.01 atmosphere 1010.0 30 < th dose independent rect. 22 1
337 36.01 radiation 1.0 30 < th dose independent rect. 22 1
342 36.01 temperature 10.0 30 > th dose independent rect. 23 23
343 36.01 radiation 1.0 30 < th dose dependent rect. 22 1
348 36.02 wind 1.0 30 > th dose independent rect. 22 1
349 36.02 humidity 50.0 30 > th dose dependent rect. 22 1
356 36.04 humidity 80.0 90 > th dose dependent rect. 15 1
360 36.05 radiation 40.0 30 > th dose dependent rect. 12 1
367 36.09 temperature 25.0 90 < th dose independent rect. 14 1
372 36.10 humidity 90.0 30 < th dose dependent rect. 22 1
379 36.12 atmosphere 1015.0 30 < th dose dependent rect. 22 1
384 36.15 humidity 60.0 30 > th dose independent rect. 12 1
386 36.15 wind 1.0 30 > th dose dependent rect. 22 1
403 36.21 temperature 30.0 30 < th dose dependent rect. 22 1
405 36.21 atmosphere 1015.0 30 < th dose dependent rect. 12 1
431 36.28 humidity 50.0 30 > th dose dependent rect. 12 1
454 36.33 wind 1.0 30 > th dose dependent rect. 12 1
455 36.34 temperature 10.0 1440 > th dose independent rect. 13 1
459 36.34 atmosphere 995.0 1440 > th dose independent rect. 13 1
462 36.34 temperature 10.0 1440 > th dose independent rect. 14 23
475 36.36 wind 9.0 30 < th dose independent rect. 23 23
481 36.38 wind 9.0 30 < th dose independent rect. 13 23
499 36.41 humidity 80.0 10 > th dose independent rect. 15 1
555 36.48 atmosphere 1015.0 10 < th dose independent rect. 13 23
580 36.56 temperature 30.0 30 < th dose dependent rect. 12 1
594 36.60 radiation 1.0 270 < th dose dependent rect. 9 20
595 36.60 radiation 1.0 270 < th dose dependent rect. 18 22
597 36.61 radiation 1.0 270 < th dose independent rect. 19 22
621 36.64 radiation 1.0 270 < th dose independent rect. 9 21
626 36.65 radiation 1.0 270 < th dose independent rect. 10 19
651 36.69 wind 7.0 10 > th dose dependent rect. 16 1
691 36.72 humidity 80.0 10 > th dose dependent rect. 12 5
706 36.75 atmosphere 1005.0 10 < th dose independent rect. 14 2
714 36.76 radiation 1.0 270 > th dose independent rect. 6 23
720 36.76 radiation 1.0 270 < th dose dependent rect. 1 23
737 36.78 radiation 1.0 270 > th dose independent rect. 6 13
772 36.80 wind 1.0 30 < th dose dependent rect. 10 2
777 36.81 wind 1.0 30 < th dose independent rect. 10 2
780 36.81 radiation 1.0 270 < th dose dependent no NA NA
794 36.82 atmosphere 995.0 30 > th dose independent rect. 23 23
796 36.82 wind 1.0 270 < th dose dependent rect. 10 1
818 36.84 radiation 1.0 10 < th dose dependent rect. 4 13
832 36.86 wind 1.0 270 < th dose independent rect. 10 2
878 36.90 humidity 50.0 1440 > th dose independent rect. 8 2
892 36.91 humidity 50.0 1440 > th dose independent rect. 5 6
897 36.92 radiation 1.0 270 > th dose independent no NA NA
898 36.92 radiation 1.0 270 < th dose independent no NA NA
903 36.92 radiation 1.0 270 > th dose independent rect. 4 15
948 36.92 radiation 1.0 270 < th dose dependent sin 0 NA
977 36.94 radiation 20.0 270 < th dose independent rect. 12 1
981 36.94 humidity 50.0 1440 > th dose independent rect. 23 12
995 36.95 humidity 50.0 1440 > th dose independent rect. 1 10