Os03g0570200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0570200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 166.41 | 0.606 | 4.52 | 0.164 | 1.19 | -0.935 | 0.434 | -2.05 | 0.131 | 3.38 | 24.94 | 544 | -- | -- |
| 171.98 | 0.611 | 4.57 | -0.163 | 1.2 | -0.739 | 0.332 | -- | 0.061 | 3.34 | 25.4 | 526 | -- | -- |
| 166.95 | 0.602 | 4.53 | 0.152 | 1.19 | -0.935 | -- | -2.04 | 0.129 | 3.42 | 24.85 | 569 | -- | -- |
| 172.31 | 0.611 | 4.57 | -0.201 | 1.2 | -0.761 | -- | -- | 0.0504 | 3.4 | 25.4 | 538 | -- | -- |
| 236.05 | 0.716 | 4.54 | 0.117 | -- | -1.21 | -- | -2.01 | 0.0899 | -- | 25.72 | 1006 | -- | -- |
| 180.47 | 0.63 | 4.53 | 0.015 | 1.16 | -- | 0.393 | -- | 0.216 | 3.01 | -- | -- | -- | -- |
| 180.97 | 0.63 | 4.53 | 0.00637 | 1.17 | -- | -- | -- | 0.214 | 3.06 | -- | -- | -- | -- |
| 240.46 | 0.722 | 4.59 | -0.27 | -- | -1.09 | -- | -- | -0.00219 | -- | 26.9 | 1061 | -- | -- |
| 173.23 | 0.613 | 4.56 | -- | 1.2 | -0.683 | -- | -- | 0.0825 | 3.38 | 25.4 | 526 | -- | -- |
| 258.84 | 0.752 | 4.53 | 0.0561 | -- | -- | -- | -- | 0.244 | -- | -- | -- | -- | -- |
| 180.97 | 0.629 | 4.53 | -- | 1.17 | -- | -- | -- | 0.213 | 3.06 | -- | -- | -- | -- |
| 242.12 | 0.725 | 4.57 | -- | -- | -0.968 | -- | -- | 0.0513 | -- | 26.8 | 1054 | -- | -- |
| 258.92 | 0.751 | 4.53 | -- | -- | -- | -- | -- | 0.238 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 162.17 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 2 | 162.43 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 3 |
| 10 | 163.94 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 12 | 164.07 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 14 | 164.12 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 16 | 164.15 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 14 |
| 17 | 164.15 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 18 | 164.15 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 14 |
| 19 | 164.24 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 14 |
| 21 | 164.29 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 23 | 164.43 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 27 | 164.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 28 | 164.59 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 7 |
| 30 | 164.65 | wind | 1.0 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 32 | 164.67 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 44 | 164.85 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 7 |
| 51 | 164.92 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 52 | 164.93 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 60 | 165.00 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 62 | 165.00 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 20 | 7 |
| 81 | 165.15 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 5 |
| 83 | 165.16 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 91 | 165.17 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 22 | 16 |
| 94 | 165.20 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 22 | 5 |
| 103 | 165.24 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 22 | 12 |
| 107 | 165.25 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 22 | 3 |
| 119 | 165.28 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 11 |
| 123 | 165.30 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 21 | 13 |
| 146 | 165.37 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 178 | 165.53 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 23 | 3 |
| 194 | 165.59 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 22 | 7 |
| 223 | 165.70 | temperature | 25.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 233 | 165.76 | temperature | 25.0 | 720 | < th | dose independent | rect. | 20 | 11 |
| 240 | 165.79 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 6 |
| 249 | 165.83 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 10 | 19 |
| 270 | 165.90 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 22 | 5 |
| 275 | 165.90 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 8 |
| 307 | 165.99 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 308 | 165.99 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 322 | 166.01 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 340 | 166.05 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 2 | 4 |
| 346 | 166.06 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 349 | 166.07 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 356 | 166.08 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 23 | 10 |
| 358 | 166.09 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 359 | 166.09 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 370 | 166.11 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 382 | 166.15 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 385 | 166.15 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 396 | 166.17 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 429 | 166.26 | wind | 1.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 433 | 166.26 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 6 |
| 437 | 166.27 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 449 | 166.29 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 460 | 166.32 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 489 | 166.39 | wind | 1.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 493 | 166.40 | temperature | 25.0 | 720 | < th | dose independent | sin | 10 | NA |
| 498 | 166.41 | wind | 1.0 | 43200 | < th | dose dependent | sin | 9 | NA |
| 513 | 166.44 | wind | 3.0 | 14400 | < th | dose dependent | sin | 11 | NA |
| 524 | 166.46 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 538 | 166.48 | temperature | 25.0 | 270 | < th | dose dependent | sin | 9 | NA |
| 614 | 166.64 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 641 | 166.68 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 1 | NA |
| 699 | 166.76 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 706 | 166.77 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 707 | 166.77 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 724 | 166.80 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 22 | 10 |
| 763 | 166.88 | temperature | 25.0 | 720 | > th | dose independent | rect. | 20 | 12 |
| 804 | 166.94 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 850 | 167.00 | wind | 1.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 895 | 167.05 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 904 | 167.07 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 3 |
| 947 | 167.13 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 950 | 167.13 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 951 | 167.13 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 1 |