Os03g0567100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0567100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 191.18 | 0.65 | 8.85 | 0.334 | 3.96 | -4.57 | -2.74 | -14.2 | -0.378 | 16.6 | 0.5548 | 1427 | -- | -- |
| 245.56 | 0.73 | 9.09 | -0.906 | 3.93 | -1.56 | -3.11 | -- | -0.662 | 16.5 | 5.049 | 1382 | -- | -- |
| 209.05 | 0.673 | 8.85 | 0.283 | 3.96 | -4.63 | -- | -14.1 | -0.377 | 16.5 | 0.386 | 1417 | -- | -- |
| 262.77 | 0.755 | 9.09 | -0.868 | 3.01 | -2.52 | -- | -- | -0.707 | 17.8 | 5.276 | 1753 | -- | -- |
| 560.55 | 1.1 | 8.97 | -0.302 | -- | -5.56 | -- | -13.6 | -0.809 | -- | 0.498 | 2128 | -- | -- |
| 291.08 | 0.8 | 9.04 | -0.717 | 3.85 | -- | -3.23 | -- | -0.403 | 16.7 | -- | -- | -- | -- |
| 318.3 | 0.835 | 9.05 | -0.733 | 3.83 | -- | -- | -- | -0.419 | 16.8 | -- | -- | -- | -- |
| 315.32 | 0.827 | 9.04 | -0.902 | -- | -4.11 | -- | -- | -0.652 | -- | 4.665 | 582 | -- | -- |
| 280.95 | 0.781 | 9.09 | -- | 2.91 | -2.21 | -- | -- | -0.622 | 17.5 | 8.774 | 1800 | -- | -- |
| 1095.65 | 1.55 | 9.01 | -0.877 | -- | -- | -- | -- | -0.519 | -- | -- | -- | -- | -- |
| 332.47 | 0.853 | 9.03 | -- | 3.85 | -- | -- | -- | -0.338 | 16.8 | -- | -- | -- | -- |
| 335.41 | 0.853 | 9.02 | -- | -- | -4.12 | -- | -- | -0.552 | -- | 6.56 | 575 | -- | -- |
| 1115.95 | 1.56 | 8.99 | -- | -- | -- | -- | -- | -0.422 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 187.17 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 8 | 21 |
| 5 | 193.09 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 7 | 193.60 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 8 | 16 |
| 19 | 194.03 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 8 | 11 |
| 25 | 194.21 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 11 | 18 |
| 35 | 194.46 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 12 | 12 |
| 50 | 194.69 | radiation | 1.0 | 4320 | < th | dose dependent | sin | 19 | NA |
| 63 | 194.89 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 12 | 7 |
| 107 | 195.90 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 17 |
| 114 | 195.97 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 12 |
| 121 | 196.29 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 8 | 11 |
| 137 | 196.41 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 179 | 196.70 | wind | 5.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 197 | 196.92 | wind | 5.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 232 | 197.11 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 267 | 197.27 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 275 | 197.34 | radiation | 1.0 | 4320 | > th | dose independent | sin | 19 | NA |
| 276 | 197.34 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 12 | 7 |
| 299 | 197.40 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 335 | 197.65 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 16 | 7 |
| 341 | 197.66 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 347 | 197.70 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 355 | 197.72 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 378 | 197.94 | radiation | 1.0 | 14400 | < th | dose independent | sin | 19 | NA |
| 390 | 197.94 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 15 | 8 |
| 404 | 197.96 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 456 | 198.16 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 490 | 198.29 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 501 | 198.30 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 15 | 4 |
| 553 | 198.48 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 12 | 12 |
| 563 | 198.55 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 587 | 198.63 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 12 | 7 |
| 610 | 198.70 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 633 | 198.80 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 635 | 198.80 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 14 | 10 |
| 671 | 198.86 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 699 | 198.92 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 725 | 198.96 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 764 | 199.06 | temperature | 25.0 | 720 | > th | dose dependent | sin | 11 | NA |
| 769 | 199.08 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 13 |
| 831 | 199.27 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 17 |
| 881 | 199.39 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 5 | 20 |
| 932 | 199.55 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 13 | NA |