Os03g0563100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant-specific FAD-dependent oxidoreductase family protein.
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Os03g0563100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant-specific FAD-dependent oxidoreductase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 261.12 | 0.759 | 9.16 | -2.51 | 1.82 | -3.97 | -1.5 | 30.4 | -1.3 | 2.14 | 1005 | 11 | 0.0142 | 7.93 |
| 326.03 | 0.847 | 9.19 | -2.74 | 1.69 | 1.7 | -0.495 | -- | -1.19 | 1.96 | 995.8 | 2 | 1.58 | 6.2 |
| 268.77 | 0.764 | 9.16 | -2.45 | 1.8 | -4.04 | -- | 29.9 | -1.28 | 2.16 | 1005 | 12 | 0.35 | 7.55 |
| 319.81 | 0.838 | 9.19 | -2.76 | 1.66 | 1.44 | -- | -- | -1.17 | 1.93 | 1002 | 5 | 1.74 | 6.35 |
| 455.5 | 0.994 | 9.14 | -2.33 | -- | -3.08 | -- | 29.8 | -1.19 | -- | 1004 | 7 | 0.196 | 7.77 |
| 328.95 | 0.85 | 9.19 | -2.73 | 1.71 | -- | -0.446 | -- | -1.19 | 1.97 | -- | -- | -- | -- |
| 329.67 | 0.85 | 9.19 | -2.72 | 1.71 | -- | -- | -- | -1.19 | 2.04 | -- | -- | -- | -- |
| 484.45 | 1.03 | 9.17 | -2.72 | -- | 2.04 | -- | -- | -1.12 | -- | 1003 | 2 | 1.94 | 6.07 |
| 520.11 | 1.07 | 9.12 | -- | 1.63 | 0.954 | -- | -- | -0.871 | 1.93 | 1002 | 5 | 1.74 | 6.35 |
| 505.41 | 1.05 | 9.17 | -2.65 | -- | -- | -- | -- | -1.15 | -- | -- | -- | -- | -- |
| 524.43 | 1.07 | 9.12 | -- | 1.66 | -- | -- | -- | -0.888 | 2 | -- | -- | -- | -- |
| 666.55 | 1.2 | 9.12 | -- | -- | 0.761 | -- | -- | -0.898 | -- | 1027 | 37 | 1.23 | 6.6 |
| 690.26 | 1.23 | 9.11 | -- | -- | -- | -- | -- | -0.857 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 263.35 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 8 |
| 4 | 264.58 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 1 | 3 |
| 7 | 265.02 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 8 | 265.15 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 1 | 3 |
| 11 | 265.60 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 18 | 266.55 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 29 | 267.67 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 22 | 8 |
| 44 | 269.55 | precipitation | 0.1 | 270 | < th | dose independent | sin | 10 | NA |
| 45 | 269.55 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 10 | NA |
| 46 | 269.91 | humidity | 90.0 | 720 | < th | dose independent | rect. | 20 | 4 |
| 52 | 270.51 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 57 | 271.00 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 63 | 271.46 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 22 | 8 |
| 69 | 271.88 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 80 | 272.59 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 3 |
| 105 | 273.92 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 1 |
| 130 | 274.96 | atmosphere | 1010.0 | 30 | < th | dose dependent | sin | 8 | NA |
| 132 | 274.97 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 135 | 275.03 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 153 | 275.38 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 155 | 275.41 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 170 | 275.87 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 18 | 12 |
| 172 | 275.90 | humidity | 70.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 179 | 276.10 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 209 | 276.66 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 8 | 18 |
| 210 | 276.69 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 18 | 10 |
| 211 | 276.70 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 212 | 276.75 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 232 | 277.24 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 248 | 277.60 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 260 | 277.83 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 21 | NA |
| 261 | 277.85 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 1 | 14 |
| 277 | 278.03 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 287 | 278.12 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 308 | 278.51 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 309 | 278.51 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 311 | 278.54 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 11 | 15 |
| 322 | 278.70 | humidity | 50.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 457 | 279.92 | humidity | 90.0 | 720 | > th | dose dependent | sin | 16 | NA |
| 461 | 279.96 | precipitation | 0.1 | 270 | > th | dose independent | sin | 10 | NA |
| 519 | 280.57 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 3 |
| 528 | 280.63 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 23 | 12 |
| 547 | 280.79 | humidity | 90.0 | 720 | < th | dose independent | rect. | 13 | 12 |
| 552 | 280.81 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 14 |
| 567 | 280.92 | humidity | 90.0 | 720 | < th | dose independent | rect. | 15 | 9 |
| 573 | 280.95 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 18 |
| 577 | 280.99 | humidity | 90.0 | 90 | > th | dose independent | rect. | 23 | 12 |
| 584 | 281.02 | humidity | 90.0 | 30 | > th | dose independent | sin | 6 | NA |
| 604 | 281.12 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 24 | 19 |
| 614 | 281.25 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 18 | 19 |
| 724 | 281.85 | humidity | 80.0 | 1440 | > th | dose independent | sin | 1 | NA |
| 739 | 281.94 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 24 | 8 |
| 740 | 281.94 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 14 |
| 759 | 282.08 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 22 | 17 |
| 782 | 282.20 | humidity | 90.0 | 90 | > th | dose independent | rect. | 23 | 10 |
| 816 | 282.34 | humidity | 90.0 | 30 | > th | dose independent | rect. | 24 | 8 |
| 830 | 282.43 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 12 | 2 |
| 831 | 282.44 | radiation | 10.0 | 1440 | > th | dose independent | sin | 21 | NA |
| 861 | 282.54 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 19 | 10 |
| 862 | 282.55 | humidity | 80.0 | 1440 | < th | dose independent | sin | 1 | NA |
| 876 | 282.62 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 882 | 282.65 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 913 | 282.81 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 19 | 7 |
| 990 | 283.14 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 20 | 19 |