Os03g0558700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0558700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.16 | 0.367 | 7.36 | -0.658 | 1.47 | 0.211 | 0.584 | 2.56 | 0.262 | 4.4 | 999.5 | 9981 | -- | -- |
| 69.68 | 0.389 | 7.31 | -0.136 | 1.46 | 0.395 | 0.522 | -- | 0.326 | 4.45 | 997.5 | 4417 | -- | -- |
| 62.06 | 0.367 | 7.36 | -0.661 | 1.48 | 0.205 | -- | 2.54 | 0.258 | 4.45 | 999.6 | 10089 | -- | -- |
| 70.21 | 0.39 | 7.3 | -0.139 | 1.46 | 0.385 | -- | -- | 0.352 | 4.45 | 994.9 | 10888 | -- | -- |
| 177.86 | 0.621 | 7.36 | -0.531 | -- | 0.156 | -- | 2.32 | 0.314 | -- | 997.6 | 10497 | -- | -- |
| 72.44 | 0.399 | 7.3 | -0.218 | 1.45 | -- | 0.535 | -- | 0.358 | 4.42 | -- | -- | -- | -- |
| 73.2 | 0.401 | 7.3 | -0.222 | 1.46 | -- | -- | -- | 0.355 | 4.47 | -- | -- | -- | -- |
| 182.29 | 0.632 | 7.33 | -0.131 | -- | 0.66 | -- | -- | 0.306 | -- | 990.2 | 13150 | -- | -- |
| 70.66 | 0.392 | 7.3 | -- | 1.46 | 0.414 | -- | -- | 0.371 | 4.47 | 995.1 | 10865 | -- | -- |
| 186.92 | 0.639 | 7.31 | -0.165 | -- | -- | -- | -- | 0.393 | -- | -- | -- | -- | -- |
| 74.51 | 0.404 | 7.29 | -- | 1.45 | -- | -- | -- | 0.38 | 4.47 | -- | -- | -- | -- |
| 182.74 | 0.632 | 7.33 | -- | -- | 0.677 | -- | -- | 0.318 | -- | 992.2 | 13150 | -- | -- |
| 187.64 | 0.639 | 7.31 | -- | -- | -- | -- | -- | 0.412 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.41 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 3 | 19 |
| 2 | 59.62 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 18 |
| 5 | 59.91 | wind | 5.0 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 8 | 60.17 | wind | 5.0 | 90 | < th | dose dependent | rect. | 5 | 13 |
| 11 | 60.38 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 13 | 60.41 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 2 | 22 |
| 15 | 60.44 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 4 | 3 |
| 18 | 60.64 | wind | 5.0 | 90 | < th | dose dependent | rect. | 5 | 16 |
| 20 | 60.72 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 23 | 60.77 | wind | 3.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 27 | 60.83 | radiation | 40.0 | 270 | < th | dose independent | rect. | 12 | 11 |
| 28 | 60.88 | radiation | 1.0 | 90 | < th | dose dependent | sin | 8 | NA |
| 30 | 60.89 | wind | 3.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 37 | 61.06 | wind | 3.0 | 90 | < th | dose independent | rect. | 5 | 16 |
| 56 | 61.45 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 57 | 61.45 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 23 | 3 |
| 59 | 61.46 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 60 | 61.48 | radiation | 1.0 | 90 | < th | dose independent | sin | 8 | NA |
| 64 | 61.52 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 3 |
| 65 | 61.53 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 22 |
| 72 | 61.65 | radiation | 1.0 | 90 | > th | dose independent | sin | 8 | NA |
| 73 | 61.67 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 20 |
| 86 | 61.78 | temperature | 25.0 | 10 | > th | dose independent | rect. | 4 | 6 |
| 98 | 61.89 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 22 | 5 |
| 99 | 61.91 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 3 |
| 100 | 61.92 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 23 | 3 |
| 101 | 61.95 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 3 |
| 102 | 61.95 | radiation | 1.0 | 720 | > th | dose independent | rect. | 16 | 21 |
| 103 | 61.95 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 3 |
| 104 | 61.97 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 3 |
| 105 | 61.97 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 106 | 61.97 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 3 |
| 107 | 61.97 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 110 | 61.97 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 111 | 61.97 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 3 |
| 117 | 61.97 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 21 |
| 118 | 61.97 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 3 |
| 132 | 62.02 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 23 | 6 |
| 157 | 62.18 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 162 | 62.22 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 165 | 62.23 | wind | 9.0 | 270 | < th | dose dependent | rect. | 23 | 3 |
| 168 | 62.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 10 |
| 170 | 62.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 173 | 62.28 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 4 |
| 180 | 62.32 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 22 | 5 |
| 182 | 62.33 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 5 |
| 183 | 62.33 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 5 |
| 189 | 62.36 | wind | 9.0 | 270 | < th | dose independent | rect. | 22 | 5 |
| 190 | 62.36 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 5 |
| 191 | 62.36 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 5 |
| 192 | 62.36 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 5 |
| 195 | 62.36 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 5 |
| 196 | 62.36 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 5 |
| 201 | 62.36 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 19 |
| 204 | 62.36 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 22 | 5 |
| 210 | 62.37 | radiation | 20.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 212 | 62.38 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 4 |
| 214 | 62.38 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 216 | 62.39 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 17 | 14 |
| 227 | 62.46 | humidity | 80.0 | 270 | > th | dose independent | rect. | 4 | 3 |
| 228 | 62.46 | radiation | 10.0 | 270 | < th | dose independent | rect. | 4 | 4 |
| 241 | 62.50 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 244 | 62.50 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 247 | 62.51 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 250 | 62.52 | wind | 3.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 251 | 62.52 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 4 | 5 |
| 253 | 62.53 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 254 | 62.53 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 255 | 62.53 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 262 | 62.55 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 21 |
| 264 | 62.56 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 266 | 62.57 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 4 | 3 |
| 281 | 62.62 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 14 |
| 284 | 62.63 | humidity | 80.0 | 270 | > th | dose independent | rect. | 4 | 5 |
| 285 | 62.63 | atmosphere | 1015.0 | 4320 | < th | dose dependent | rect. | 14 | 3 |
| 287 | 62.64 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 21 |
| 288 | 62.64 | atmosphere | 1015.0 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 289 | 62.64 | atmosphere | 995.0 | 4320 | > th | dose dependent | rect. | 15 | 2 |
| 294 | 62.64 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 16 |
| 296 | 62.64 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 21 |
| 298 | 62.65 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 388 | 62.74 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 414 | 62.77 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 9 |
| 421 | 62.78 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 19 |
| 444 | 62.81 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 462 | 62.82 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 20 |
| 485 | 62.85 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 19 |
| 496 | 62.85 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 19 |
| 507 | 62.86 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 18 |
| 511 | 62.86 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 3 | 20 |
| 516 | 62.87 | radiation | 1.0 | 720 | > th | dose independent | rect. | 16 | 19 |
| 532 | 62.89 | wind | 1.0 | 90 | > th | dose independent | rect. | 1 | 3 |
| 563 | 62.92 | atmosphere | 995.0 | 4320 | > th | dose dependent | sin | 21 | NA |
| 564 | 62.92 | atmosphere | 1015.0 | 4320 | < th | dose dependent | sin | 21 | NA |
| 566 | 62.92 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 586 | 62.94 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 587 | 62.94 | wind | 1.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 598 | 62.95 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 617 | 62.96 | radiation | 10.0 | 270 | < th | dose independent | rect. | 15 | 17 |
| 645 | 62.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 21 |
| 660 | 62.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 21 |
| 695 | 63.00 | humidity | 90.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 801 | 63.05 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 7 | 23 |
| 804 | 63.05 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 4 |
| 822 | 63.06 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 14 |
| 855 | 63.07 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 859 | 63.07 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 4 | 5 |
| 883 | 63.08 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 916 | 63.09 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 917 | 63.09 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 918 | 63.09 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 16 |
| 921 | 63.09 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 4 |
| 945 | 63.10 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 987 | 63.11 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 996 | 63.11 | wind | 7.0 | 90 | < th | dose dependent | rect. | 5 | 4 |