Os03g0448500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3) (Antiquitin 1) (Matured fruit 60 kDa protein) (MF-60).
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Os03g0448500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3) (Antiquitin 1) (Matured fruit 60 kDa protein) (MF-60).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.51 | 0.452 | 7.76 | -0.227 | 0.55 | -1.04 | 0.282 | 4.12 | -0.129 | 0.409 | 26.76 | 1246 | -- | -- |
| 98.48 | 0.462 | 7.83 | -1.01 | 0.537 | -0.644 | 0.253 | -- | -0.172 | 0.742 | 23.48 | 1233 | -- | -- |
| 92.83 | 0.449 | 7.76 | -0.228 | 0.553 | -1.04 | -- | 4.16 | -0.128 | 0.489 | 26.7 | 1240 | -- | -- |
| 96.42 | 0.457 | 7.88 | -1.2 | 0.548 | -0.598 | -- | -- | -0.323 | 0.534 | 26.59 | 1213 | -- | -- |
| 106.71 | 0.481 | 7.74 | -0.227 | -- | -1.04 | -- | 4.24 | -0.0798 | -- | 26.33 | 1679 | -- | -- |
| 110.63 | 0.493 | 7.88 | -1.37 | 0.444 | -- | 0.274 | -- | -0.328 | 0.303 | -- | -- | -- | -- |
| 110.94 | 0.493 | 7.88 | -1.38 | 0.443 | -- | -- | -- | -0.33 | 0.427 | -- | -- | -- | -- |
| 109.4 | 0.489 | 7.84 | -1.23 | -- | -0.745 | -- | -- | -0.216 | -- | 22.65 | 8946 | -- | -- |
| 131.53 | 0.534 | 7.83 | -- | 0.574 | -0.855 | -- | -- | -0.135 | 0.58 | 25.53 | 1246 | -- | -- |
| 123.29 | 0.519 | 7.87 | -1.37 | -- | -- | -- | -- | -0.323 | -- | -- | -- | -- | -- |
| 161.31 | 0.594 | 7.84 | -- | 0.424 | -- | -- | -- | -0.176 | 0.261 | -- | -- | -- | -- |
| 119.56 | 0.509 | 7.73 | -- | -- | -1.09 | -- | -- | 0.275 | -- | 17.07 | 29192 | -- | -- |
| 172.6 | 0.613 | 7.83 | -- | -- | -- | -- | -- | -0.171 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.13 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 2 | 87.18 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 18 |
| 7 | 88.10 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 9 | 88.25 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 21 | 89.16 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 11 | 9 |
| 23 | 89.29 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 10 |
| 25 | 89.31 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 15 | 10 |
| 36 | 89.51 | humidity | 80.0 | 270 | < th | dose independent | rect. | 12 | 6 |
| 37 | 89.52 | humidity | 80.0 | 270 | < th | dose independent | rect. | 12 | 8 |
| 41 | 89.62 | radiation | 1.0 | 270 | < th | dose independent | rect. | 10 | 16 |
| 46 | 89.68 | radiation | 1.0 | 270 | > th | dose independent | rect. | 10 | 21 |
| 56 | 89.79 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 11 | 16 |
| 57 | 89.80 | humidity | 70.0 | 270 | > th | dose independent | rect. | 14 | 11 |
| 67 | 89.98 | humidity | 70.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 68 | 89.99 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 14 | 12 |
| 72 | 90.06 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 19 |
| 107 | 90.45 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 10 | 16 |
| 130 | 90.69 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 12 | 16 |
| 167 | 90.98 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 173 | 91.04 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 179 | 91.08 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 187 | 91.12 | humidity | 70.0 | 270 | > th | dose independent | rect. | 11 | 14 |
| 204 | 91.20 | radiation | 1.0 | 270 | > th | dose independent | sin | 17 | NA |
| 248 | 91.45 | humidity | 60.0 | 270 | > th | dose dependent | sin | 19 | NA |
| 264 | 91.54 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 10 |
| 287 | 91.62 | radiation | 1.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 359 | 91.87 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 366 | 91.90 | radiation | 1.0 | 270 | < th | dose independent | sin | 17 | NA |
| 424 | 92.07 | radiation | 1.0 | 270 | < th | dose dependent | sin | 17 | NA |
| 438 | 92.10 | humidity | 90.0 | 270 | < th | dose dependent | sin | 19 | NA |
| 454 | 92.14 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 14 | 19 |
| 457 | 92.16 | humidity | 70.0 | 270 | > th | dose independent | sin | 18 | NA |
| 459 | 92.17 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 491 | 92.21 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 498 | 92.23 | humidity | 50.0 | 10 | > th | dose dependent | sin | 15 | NA |
| 521 | 92.30 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 549 | 92.35 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 17 |
| 555 | 92.35 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 557 | 92.36 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 569 | 92.38 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 674 | 92.64 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 14 | 13 |
| 697 | 92.69 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 10 |
| 718 | 92.74 | humidity | 90.0 | 30 | < th | dose dependent | sin | 15 | NA |
| 731 | 92.77 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 781 | 92.86 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 813 | 92.97 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 814 | 92.97 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 881 | 93.12 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 882 | 93.12 | humidity | 80.0 | 10 | < th | dose independent | rect. | 13 | 8 |
| 902 | 93.17 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 907 | 93.18 | humidity | 70.0 | 270 | < th | dose independent | sin | 18 | NA |
| 913 | 93.19 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 23 |
| 917 | 93.19 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 23 |