Os03g0442900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0442900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121.99 | 0.519 | 4.87 | -0.682 | 0.669 | -0.361 | -0.0818 | 4.94 | 0.0903 | 20.2 | 29.3 | 783 | -- | -- |
| 125.51 | 0.526 | 4.78 | 0.0764 | 0.742 | 0.193 | -0.445 | -- | 0.263 | 19.5 | 28 | 1544 | -- | -- |
| 122.01 | 0.514 | 4.87 | -0.691 | 0.67 | -0.364 | -- | 5.02 | 0.0878 | 20.2 | 29.34 | 783 | -- | -- |
| 126.02 | 0.526 | 4.78 | 0.0923 | 0.747 | 0.212 | -- | -- | 0.263 | 19.4 | 28 | 1544 | -- | -- |
| 138.74 | 0.549 | 4.87 | -0.825 | -- | -0.759 | -- | 4.24 | -0.0107 | -- | 28.21 | 789 | -- | -- |
| 127.62 | 0.53 | 4.78 | 0.0211 | 0.712 | -- | -0.553 | -- | 0.252 | 20.1 | -- | -- | -- | -- |
| 128.53 | 0.531 | 4.78 | 0.0374 | 0.714 | -- | -- | -- | 0.252 | 20 | -- | -- | -- | -- |
| 146.13 | 0.563 | 4.81 | -0.131 | -- | -0.499 | -- | -- | 0.104 | -- | 26.01 | 604 | -- | -- |
| 126.24 | 0.526 | 4.78 | -- | 0.744 | 0.201 | -- | -- | 0.253 | 19.4 | 28 | 1544 | -- | -- |
| 156.42 | 0.584 | 4.77 | 0.0305 | -- | -- | -- | -- | 0.243 | -- | -- | -- | -- | -- |
| 128.57 | 0.53 | 4.78 | -- | 0.714 | -- | -- | -- | 0.248 | 20 | -- | -- | -- | -- |
| 146.17 | 0.563 | 4.79 | -- | -- | -0.441 | -- | -- | 0.129 | -- | 26.04 | 605 | -- | -- |
| 156.44 | 0.584 | 4.77 | -- | -- | -- | -- | -- | 0.239 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 110.60 | atmosphere | 995 | 10 | > th | dose independent | sin | 6 | NA |
| 7 | 111.68 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 8 | 111.85 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 26 | 113.69 | temperature | 30 | 30 | > th | dose dependent | rect. | 16 | 1 |
| 32 | 114.61 | temperature | 30 | 10 | > th | dose dependent | rect. | 15 | 4 |
| 118 | 117.37 | temperature | 15 | 10 | > th | dose dependent | rect. | 16 | 10 |
| 122 | 117.59 | temperature | 30 | 10 | > th | dose dependent | sin | 12 | NA |
| 156 | 118.18 | temperature | 20 | 90 | > th | dose dependent | rect. | 17 | 8 |
| 203 | 119.15 | temperature | 25 | 270 | > th | dose dependent | rect. | 16 | 17 |
| 244 | 119.57 | temperature | 25 | 270 | > th | dose independent | rect. | 16 | 7 |
| 248 | 119.67 | atmosphere | 995 | 30 | > th | dose independent | rect. | 23 | 23 |
| 250 | 119.69 | atmosphere | 995 | 30 | > th | dose independent | rect. | 7 | 23 |
| 258 | 119.76 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 262 | 119.79 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 274 | 119.84 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 287 | 119.91 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 2 | 7 |
| 289 | 119.92 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 311 | 120.00 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 12 | 1 |
| 317 | 120.01 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 4 | 4 |
| 347 | 120.12 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 394 | 120.25 | humidity | 50 | 270 | < th | dose independent | rect. | 12 | 2 |
| 406 | 120.27 | atmosphere | 995 | 10 | > th | dose independent | rect. | 15 | 23 |
| 429 | 120.33 | temperature | 25 | 270 | > th | dose dependent | sin | 11 | NA |
| 463 | 120.42 | atmosphere | 995 | 30 | > th | dose independent | rect. | 3 | 23 |
| 480 | 120.48 | temperature | 30 | 10 | > th | dose independent | rect. | 15 | 1 |
| 497 | 120.51 | humidity | 70 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 504 | 120.54 | humidity | 90 | 10 | < th | dose independent | rect. | 3 | 13 |
| 517 | 120.58 | humidity | 50 | 270 | < th | dose dependent | rect. | 13 | 1 |
| 529 | 120.62 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 12 | 1 |
| 549 | 120.67 | temperature | 20 | 30 | > th | dose dependent | rect. | 16 | 14 |
| 657 | 121.08 | humidity | 80 | 1440 | < th | dose dependent | rect. | 21 | 10 |
| 661 | 121.10 | humidity | 70 | 90 | < th | dose independent | rect. | 8 | 1 |
| 671 | 121.12 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 684 | 121.16 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 706 | 121.25 | atmosphere | 995 | 30 | > th | dose independent | rect. | 1 | 23 |
| 707 | 121.25 | atmosphere | 995 | 30 | > th | dose independent | rect. | 13 | 23 |
| 738 | 121.32 | humidity | 60 | 1440 | > th | dose independent | rect. | 7 | 2 |
| 747 | 121.34 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 23 | 8 |
| 762 | 121.42 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 3 |
| 770 | 121.45 | temperature | 25 | 270 | > th | dose independent | rect. | 16 | 17 |
| 780 | 121.50 | atmosphere | 995 | 10 | > th | dose independent | rect. | 12 | 12 |
| 781 | 121.50 | atmosphere | 995 | 10 | > th | dose independent | rect. | 17 | 23 |
| 787 | 121.52 | atmosphere | 995 | 30 | > th | dose independent | rect. | 11 | 23 |
| 789 | 121.52 | radiation | 40 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 799 | 121.56 | humidity | 60 | 90 | < th | dose dependent | rect. | 17 | 17 |
| 815 | 121.61 | humidity | 60 | 90 | < th | dose independent | rect. | 17 | 16 |
| 827 | 121.65 | humidity | 60 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 832 | 121.67 | humidity | 60 | 720 | < th | dose dependent | rect. | 9 | 1 |
| 877 | 121.71 | humidity | 60 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 910 | 121.73 | humidity | 60 | 30 | < th | dose independent | rect. | 17 | 18 |
| 931 | 121.75 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 3 |
| 932 | 121.75 | humidity | 60 | 90 | < th | dose dependent | rect. | 18 | 15 |
| 934 | 121.76 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 1 |
| 953 | 121.79 | radiation | 30 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 956 | 121.80 | humidity | 60 | 1440 | > th | dose independent | rect. | 3 | 6 |