Os03g0438900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0438900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.28 | 0.382 | 2.74 | -0.0508 | 0.0341 | 0.894 | 0.449 | -0.656 | 0.0714 | 16.8 | 49.7 | 3652 | -- | -- |
| 66.28 | 0.379 | 2.73 | -0.029 | 0.0352 | 0.63 | 0.444 | -- | 0.0735 | 16.8 | 50.4 | 3657 | -- | -- |
| 66.79 | 0.381 | 2.74 | -0.0527 | 0.0365 | 0.894 | -- | -0.608 | 0.0749 | 16.8 | 49.84 | 3636 | -- | -- |
| 66.81 | 0.381 | 2.73 | -0.0265 | 0.0353 | 0.65 | -- | -- | 0.0722 | 16.8 | 50 | 3642 | -- | -- |
| 66.86 | 0.381 | 2.73 | -0.0527 | -- | 0.876 | -- | -0.553 | 0.0741 | -- | 49.79 | 3636 | -- | -- |
| 70.34 | 0.393 | 2.73 | 0.136 | 0.0505 | -- | 0.586 | -- | 0.0471 | 17.8 | -- | -- | -- | -- |
| 71.16 | 0.395 | 2.73 | 0.132 | 0.0562 | -- | -- | -- | 0.0493 | 18.8 | -- | -- | -- | -- |
| 66.87 | 0.381 | 2.73 | -0.0282 | -- | 0.652 | -- | -- | 0.0723 | -- | 50 | 3636 | -- | -- |
| 66.83 | 0.381 | 2.73 | -- | 0.0383 | 0.632 | -- | -- | 0.0731 | 17.1 | 50 | 3642 | -- | -- |
| 71.33 | 0.395 | 2.73 | 0.13 | -- | -- | -- | -- | 0.0482 | -- | -- | -- | -- | -- |
| 71.62 | 0.396 | 2.74 | -- | 0.0546 | -- | -- | -- | 0.0346 | 18.9 | -- | -- | -- | -- |
| 66.89 | 0.381 | 2.73 | -- | -- | 0.639 | -- | -- | 0.074 | -- | 50 | 3636 | -- | -- |
| 71.78 | 0.395 | 2.73 | -- | -- | -- | -- | -- | 0.0337 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.61 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 4 | 56.79 | humidity | 90.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 7 | 56.79 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 11 | 56.87 | radiation | 1.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 22 | 56.96 | temperature | 25.0 | 90 | < th | dose independent | rect. | 15 | 1 |
| 23 | 56.97 | temperature | 25.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 83 | 58.36 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 92 | 59.17 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 121 | 60.54 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 281 | 63.90 | temperature | 25.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 304 | 64.12 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 314 | 64.25 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 1 |
| 318 | 64.25 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 13 | 1 |
| 327 | 64.37 | wind | 3.0 | 10 | < th | dose dependent | rect. | 18 | 1 |
| 339 | 64.50 | radiation | 1.0 | 720 | < th | dose independent | rect. | 15 | 1 |
| 351 | 64.64 | radiation | 10.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 359 | 64.73 | atmosphere | 1010.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 381 | 64.91 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 382 | 64.91 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 388 | 64.96 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 402 | 65.07 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 2 | 3 |
| 448 | 65.41 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 502 | 65.68 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 9 |
| 517 | 65.74 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 527 | 65.77 | wind | 3.0 | 30 | < th | dose independent | rect. | 18 | 1 |
| 530 | 65.78 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 550 | 65.88 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 14 |
| 567 | 65.93 | wind | 3.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 571 | 65.94 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 581 | 65.97 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 601 | 66.04 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 604 | 66.07 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 621 | 66.14 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 14 | 6 |
| 650 | 66.25 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 652 | 66.25 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 655 | 66.25 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 659 | 66.25 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 668 | 66.25 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 669 | 66.25 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 670 | 66.25 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 680 | 66.25 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 691 | 66.28 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 694 | 66.28 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 699 | 66.29 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 701 | 66.29 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 702 | 66.29 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 706 | 66.29 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 708 | 66.29 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 710 | 66.29 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 715 | 66.29 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 716 | 66.29 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 717 | 66.29 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 719 | 66.29 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 724 | 66.29 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 728 | 66.30 | wind | 9.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 737 | 66.31 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 740 | 66.31 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 746 | 66.32 | radiation | 10.0 | 720 | > th | dose independent | rect. | 11 | 2 |
| 751 | 66.32 | atmosphere | 1010.0 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 755 | 66.33 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 790 | 66.40 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 13 | 14 |
| 798 | 66.41 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 803 | 66.42 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 13 | 7 |
| 837 | 66.48 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 13 | 11 |
| 851 | 66.50 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 1 |
| 853 | 66.50 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 1 |
| 862 | 66.52 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 22 | 2 |
| 867 | 66.52 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 22 | 2 |
| 914 | 66.56 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 17 | 3 |
| 923 | 66.58 | precipitation | 0.1 | 270 | > th | dose independent | sin | 17 | NA |
| 924 | 66.58 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 930 | 66.60 | wind | 3.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 931 | 66.60 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 15 | 5 |
| 947 | 66.62 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 14 | 2 |