Os03g0438200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0438200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 144.5 | 0.565 | 4.28 | -1.48 | 0.914 | 2.61 | -1.29 | -2.11 | -0.515 | 11.6 | 20.61 | 10 | -- | -- |
| 147.41 | 0.565 | 4.24 | -1.09 | 0.928 | 2.46 | -1.81 | -- | -0.397 | 11.8 | 20.65 | 6 | -- | -- |
| 150.17 | 0.575 | 4.31 | -1.73 | 0.91 | 2.68 | -- | -3.43 | -0.572 | 11.6 | 20.56 | 5 | -- | -- |
| 161.42 | 0.596 | 4.24 | -1.15 | 0.947 | 2.44 | -- | -- | -0.396 | 11.7 | 20.67 | 5 | -- | -- |
| 190.53 | 0.643 | 4.36 | -1.89 | -- | 3.31 | -- | -3.6 | -0.693 | -- | 20.65 | 3 | -- | -- |
| 241.93 | 0.729 | 4.14 | -0.602 | 1.73 | -- | -1.41 | -- | 0.0176 | 13 | -- | -- | -- | -- |
| 250.31 | 0.741 | 4.14 | -0.652 | 1.74 | -- | -- | -- | 0.0104 | 13 | -- | -- | -- | -- |
| 205.2 | 0.667 | 4.29 | -1.33 | -- | 3.16 | -- | -- | -0.533 | -- | 20.32 | 2 | -- | -- |
| 193.71 | 0.652 | 4.2 | -- | 1.07 | 2.05 | -- | -- | -0.21 | 12.1 | 21 | 4 | -- | -- |
| 438.04 | 0.978 | 4.17 | -0.718 | -- | -- | -- | -- | -0.0233 | -- | -- | -- | -- | -- |
| 261.53 | 0.756 | 4.13 | -- | 1.75 | -- | -- | -- | 0.0831 | 13 | -- | -- | -- | -- |
| 249.08 | 0.737 | 4.24 | -- | -- | 2.9 | -- | -- | -0.34 | -- | 20.73 | 2 | -- | -- |
| 451.64 | 0.992 | 4.16 | -- | -- | -- | -- | -- | 0.0564 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 144.61 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 3 | 145.09 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 4 | 145.25 | temperature | 20 | 30 | > th | dose dependent | rect. | 4 | 23 |
| 8 | 146.75 | temperature | 20 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 9 | 147.21 | temperature | 20 | 30 | > th | dose dependent | rect. | 4 | 21 |
| 19 | 148.36 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 40 | 151.97 | temperature | 20 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 41 | 151.97 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 55 | 154.14 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 60 | 154.61 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 67 | 155.47 | temperature | 20 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 71 | 155.98 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 75 | 156.20 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 77 | 156.29 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 17 |
| 79 | 156.33 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 81 | 156.43 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 84 | 156.57 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 88 | 156.70 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 95 | 157.32 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 105 | 157.77 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 109 | 157.89 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 20 |
| 111 | 157.93 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 122 | 158.33 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 137 | 158.81 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 142 | 158.94 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 144 | 159.00 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 148 | 159.15 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 170 | 159.82 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 195 | 160.63 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 217 | 161.22 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 223 | 161.46 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 233 | 161.72 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 257 | 162.64 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 282 | 163.57 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 10 |
| 293 | 163.70 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 9 |
| 322 | 163.90 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 335 | 164.01 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 390 | 164.44 | temperature | 20 | 1440 | > th | dose dependent | sin | 0 | NA |
| 409 | 164.58 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 414 | 164.64 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 456 | 164.98 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 594 | 165.99 | temperature | 10 | 10 | > th | dose dependent | sin | 23 | NA |
| 664 | 166.40 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 721 | 166.69 | temperature | 30 | 10 | < th | dose dependent | sin | 22 | NA |
| 743 | 166.82 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 957 | 167.72 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 13 |