Os03g0437100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, C2H2-type domain containing protein.
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Os03g0437100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, C2H2-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 160.08 | 0.594 | 2.79 | -0.057 | 0.154 | 0.00793 | -0.302 | 3.51 | 0.0225 | 4.32 | 0.8 | 42 | -- | -- |
| 162.66 | 0.594 | 2.8 | -0.104 | 0.158 | 0.432 | -0.0756 | -- | 0.00713 | 4.51 | 0.7066 | 38 | -- | -- |
| 160.29 | 0.59 | 2.79 | -0.0621 | 0.154 | 0.0139 | -- | 3.38 | 0.0234 | 4.7 | 0.7774 | 40 | -- | -- |
| 162.52 | 0.594 | 2.8 | -0.125 | 0.125 | 0.547 | -- | -- | 0.0295 | 4.58 | 0.7645 | 40 | -- | -- |
| 161.44 | 0.592 | 2.79 | -0.0677 | -- | 0.193 | -- | 3.03 | 0.0323 | -- | 0.7452 | 40 | -- | -- |
| 164.41 | 0.601 | 2.81 | -0.09 | 0.182 | -- | -0.106 | -- | 0.00951 | 4.51 | -- | -- | -- | -- |
| 164.44 | 0.601 | 2.81 | -0.0892 | 0.182 | -- | -- | -- | 0.0101 | 4.58 | -- | -- | -- | -- |
| 163.28 | 0.595 | 2.8 | -0.127 | -- | 0.646 | -- | -- | 0.0359 | -- | 0.7509 | 40 | -- | -- |
| 162.92 | 0.594 | 2.8 | -- | 0.126 | 0.514 | -- | -- | 0.0419 | 4.61 | 0.7549 | 40 | -- | -- |
| 166.2 | 0.602 | 2.81 | -0.0821 | -- | -- | -- | -- | 0.0149 | -- | -- | -- | -- | -- |
| 164.65 | 0.6 | 2.8 | -- | 0.18 | -- | -- | -- | 0.02 | 4.59 | -- | -- | -- | -- |
| 163.7 | 0.596 | 2.8 | -- | -- | 0.613 | -- | -- | 0.0486 | -- | 0.7605 | 40 | -- | -- |
| 166.38 | 0.602 | 2.81 | -- | -- | -- | -- | -- | 0.024 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 152.98 | wind | 1 | 10 | < th | dose independent | rect. | 14 | 4 |
| 5 | 152.98 | wind | 1 | 10 | < th | dose dependent | rect. | 14 | 4 |
| 9 | 152.99 | wind | 1 | 10 | < th | dose independent | rect. | 13 | 1 |
| 15 | 152.99 | wind | 1 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 21 | 153.00 | wind | 1 | 90 | < th | dose dependent | rect. | 12 | 2 |
| 23 | 153.02 | wind | 1 | 90 | < th | dose independent | rect. | 12 | 1 |
| 197 | 154.33 | humidity | 80 | 10 | > th | dose independent | rect. | 9 | 2 |
| 248 | 154.95 | wind | 1 | 30 | < th | dose dependent | sin | 22 | NA |
| 249 | 154.97 | temperature | 25 | 10 | > th | dose independent | rect. | 24 | 6 |
| 267 | 155.11 | wind | 1 | 10 | < th | dose dependent | rect. | 6 | 9 |
| 293 | 155.30 | humidity | 80 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 296 | 155.35 | wind | 1 | 30 | < th | dose independent | sin | 22 | NA |
| 338 | 156.03 | wind | 1 | 10 | < th | dose independent | rect. | 6 | 9 |
| 378 | 156.36 | humidity | 80 | 30 | < th | dose independent | rect. | 1 | 1 |
| 382 | 156.36 | humidity | 80 | 30 | < th | dose dependent | rect. | 1 | 1 |
| 439 | 156.73 | wind | 1 | 10 | > th | dose independent | sin | 21 | NA |
| 442 | 156.82 | radiation | 10 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 455 | 156.82 | radiation | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 546 | 157.35 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 549 | 157.43 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 578 | 157.66 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 24 | 5 |
| 588 | 157.72 | radiation | 30 | 270 | > th | dose dependent | rect. | 7 | 1 |
| 633 | 158.16 | wind | 9 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 640 | 158.23 | wind | 1 | 10 | > th | dose independent | rect. | 4 | 1 |
| 654 | 158.36 | wind | 1 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 682 | 158.53 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 685 | 158.55 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 24 | 1 |
| 688 | 158.56 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 712 | 158.76 | wind | 1 | 30 | < th | dose independent | rect. | 10 | 16 |
| 724 | 158.82 | temperature | 25 | 1440 | > th | dose independent | rect. | 24 | 1 |
| 735 | 158.87 | temperature | 25 | 1440 | < th | dose independent | rect. | 24 | 1 |
| 756 | 158.95 | temperature | 20 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 768 | 159.01 | wind | 1 | 30 | > th | dose independent | rect. | 12 | 12 |
| 788 | 159.08 | temperature | 25 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 793 | 159.10 | temperature | 25 | 90 | > th | dose independent | rect. | 4 | 1 |
| 799 | 159.11 | temperature | 25 | 10 | > th | dose independent | rect. | 4 | 1 |
| 800 | 159.11 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 1 |
| 810 | 159.11 | temperature | 20 | 10 | < th | dose dependent | rect. | 19 | 1 |
| 852 | 159.19 | wind | 1 | 90 | > th | dose independent | rect. | 5 | 18 |
| 853 | 159.20 | humidity | 90 | 90 | > th | dose independent | rect. | 18 | 1 |
| 860 | 159.21 | humidity | 90 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 864 | 159.23 | humidity | 80 | 270 | > th | dose independent | rect. | 11 | 1 |
| 868 | 159.26 | atmosphere | 1015 | 10 | < th | dose independent | rect. | 5 | 23 |
| 913 | 159.39 | wind | 1 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 914 | 159.40 | wind | 1 | 270 | > th | dose independent | rect. | 12 | 10 |
| 929 | 159.46 | humidity | 90 | 10 | < th | dose independent | rect. | 4 | 1 |
| 933 | 159.47 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 24 | 5 |
| 978 | 159.59 | temperature | 25 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 981 | 159.60 | temperature | 25 | 30 | > th | dose independent | rect. | 24 | 1 |
| 986 | 159.62 | temperature | 10 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 993 | 159.62 | humidity | 50 | 1440 | > th | dose independent | rect. | 1 | 1 |