Os03g0432200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os03g0432200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 126.92 | 0.529 | 2.75 | 0.126 | 0.141 | 0.864 | 0.24 | -5.1 | 0.168 | 0.233 | 0.2974 | 131 | -- | -- |
| 135.57 | 0.546 | 2.72 | 0.275 | 0.186 | -0.277 | 0.0239 | -- | 0.14 | 1.87 | 0.6006 | 284 | -- | -- |
| 127.05 | 0.525 | 2.75 | 0.112 | 0.143 | 0.85 | -- | -5.02 | 0.163 | 0.775 | 0.05067 | 130 | -- | -- |
| 135.57 | 0.546 | 2.72 | 0.274 | 0.186 | -0.275 | -- | -- | 0.139 | 1.93 | 0.6006 | 284 | -- | -- |
| 128.29 | 0.528 | 2.75 | 0.112 | -- | 0.908 | -- | -5.02 | 0.169 | -- | 0.1099 | 130 | -- | -- |
| 136.2 | 0.547 | 2.72 | 0.257 | 0.166 | -- | -0.04 | -- | 0.146 | 1.92 | -- | -- | -- | -- |
| 136.21 | 0.547 | 2.72 | 0.258 | 0.166 | -- | -- | -- | 0.146 | 1.8 | -- | -- | -- | -- |
| 137.01 | 0.545 | 2.72 | 0.253 | -- | 0.27 | -- | -- | 0.162 | -- | 0.3053 | 132 | -- | -- |
| 137 | 0.545 | 2.72 | -- | 0.163 | 0.243 | -- | -- | 0.132 | 1.81 | 0.03312 | 304 | -- | -- |
| 137.87 | 0.549 | 2.72 | 0.265 | -- | -- | -- | -- | 0.15 | -- | -- | -- | -- | -- |
| 137.96 | 0.549 | 2.72 | -- | 0.17 | -- | -- | -- | 0.118 | 1.84 | -- | -- | -- | -- |
| 138.32 | 0.548 | 2.72 | -- | -- | 0.357 | -- | -- | 0.147 | -- | 0.06689 | 283 | -- | -- |
| 139.72 | 0.552 | 2.72 | -- | -- | -- | -- | -- | 0.121 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.71 | wind | 1 | 90 | < th | dose dependent | rect. | 2 | 2 |
| 3 | 122.47 | wind | 1 | 90 | < th | dose independent | rect. | 2 | 2 |
| 4 | 122.53 | wind | 3 | 30 | > th | dose independent | rect. | 6 | 1 |
| 6 | 123.34 | wind | 3 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 11 | 125.63 | wind | 1 | 90 | < th | dose dependent | rect. | 21 | 7 |
| 22 | 125.94 | wind | 1 | 90 | < th | dose dependent | rect. | 11 | 17 |
| 29 | 126.95 | temperature | 25 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 30 | 126.96 | atmosphere | 1010 | 30 | < th | dose independent | rect. | 6 | 1 |
| 32 | 127.16 | radiation | 10 | 30 | < th | dose independent | rect. | 6 | 1 |
| 34 | 127.18 | wind | 7 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 38 | 127.18 | wind | 7 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 50 | 127.79 | humidity | 90 | 90 | > th | dose independent | rect. | 14 | 1 |
| 53 | 127.79 | humidity | 90 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 56 | 127.83 | radiation | 1 | 10 | < th | dose independent | rect. | 15 | 1 |
| 130 | 128.58 | atmosphere | 1010 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 131 | 128.60 | radiation | 10 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 134 | 128.73 | humidity | 90 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 138 | 128.75 | radiation | 1 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 140 | 128.77 | atmosphere | 995 | 30 | > th | dose independent | rect. | 7 | 23 |
| 141 | 128.78 | atmosphere | 995 | 10 | > th | dose independent | sin | 8 | NA |
| 162 | 129.01 | humidity | 70 | 30 | < th | dose independent | rect. | 18 | 1 |
| 163 | 129.03 | temperature | 30 | 30 | > th | dose independent | rect. | 18 | 1 |
| 182 | 129.06 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 17 | 1 |
| 219 | 129.06 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 17 | 1 |
| 226 | 129.08 | wind | 1 | 90 | < th | dose independent | rect. | 21 | 7 |
| 237 | 129.20 | wind | 1 | 90 | < th | dose independent | rect. | 17 | 11 |
| 267 | 129.30 | wind | 1 | 90 | < th | dose independent | rect. | 11 | 17 |
| 318 | 129.41 | temperature | 20 | 30 | > th | dose dependent | rect. | 3 | 1 |
| 327 | 129.48 | temperature | 30 | 90 | > th | dose dependent | rect. | 16 | 3 |
| 584 | 129.58 | atmosphere | 995 | 30 | < th | dose dependent | sin | 8 | NA |
| 606 | 129.59 | atmosphere | 995 | 10 | < th | dose independent | sin | 8 | NA |
| 609 | 129.59 | wind | 1 | 90 | < th | dose dependent | rect. | 2 | 21 |
| 631 | 129.61 | radiation | 10 | 90 | > th | dose dependent | rect. | 17 | 1 |
| 726 | 129.76 | temperature | 25 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 728 | 129.77 | wind | 1 | 90 | < th | dose dependent | rect. | 2 | 11 |
| 757 | 129.83 | radiation | 10 | 90 | > th | dose independent | rect. | 17 | 1 |
| 774 | 129.88 | wind | 1 | 90 | < th | dose dependent | rect. | 2 | 19 |
| 792 | 129.94 | wind | 1 | 90 | < th | dose dependent | rect. | 2 | 14 |
| 899 | 130.30 | temperature | 20 | 10 | > th | dose independent | rect. | 3 | 1 |
| 942 | 130.40 | wind | 1 | 90 | < th | dose independent | rect. | 2 | 21 |
| 974 | 130.49 | wind | 1 | 90 | < th | dose independent | rect. | 2 | 11 |
| 978 | 130.52 | wind | 1 | 90 | < th | dose independent | rect. | 2 | 9 |
| 985 | 130.55 | radiation | 20 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 989 | 130.56 | wind | 1 | 270 | < th | dose dependent | sin | 16 | NA |
| 996 | 130.57 | radiation | 1 | 10 | > th | dose dependent | rect. | 6 | 1 |