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Os03g0431600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.72 (0.214) R2 : 0.42
β1 : 8.66 (1.61) R2dD : 0.617 R2D : -1.5
β2 : 1.76 (0.262) R2dC : 0.0584 R2C : -0.215
β3 : -5.71 (0.858) R2dE : 0.692 R2E : -1.26
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 62.7 (6.93) R2dD*E : 2.54 R2D*E : -0.591
γ1 : -0.269 (0.257) R2dN8 : 0.00231 R2N8 : -0.271
σ : 2.05
deviance : 1929.41
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_____
C
peak time of C : 23.7
E
wheather : temperature
threshold : 30.01
memory length : 1404
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 10.2
open length of G : 1.37

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
1932.06 2.07 7.73 8.59 1.75 -5.71 0.592 62.7 -0.329 23.7 30 1412 10.1 1.47
2439.34 2.32 9.44 -4.83 1.72 -0.17 1.06 -- -1.46 0.524 21.3 32671 10.4 1.94
1929.41 2.05 7.72 8.66 1.76 -5.71 -- 62.7 -0.269 23.7 30.01 1404 10.2 1.37
2370.82 2.28 9.44 -4.94 1.64 1.47 -- -- -1.52 2.15 18.58 34336 18.8 3.47
2117.65 2.14 7.7 8.5 -- -5.5 -- 62.6 -0.286 -- 30.01 1387 10.2 1.45
2440.51 2.32 9.44 -4.84 1.82 -- 1.11 -- -1.45 0.501 -- -- -- --
2445.75 2.32 9.44 -4.88 1.81 -- -- -- -1.45 0.461 -- -- -- --
2530.3 2.35 9.42 -4.87 -- 1.56 -- -- -1.49 -- 18.58 34336 18.8 3.47
2983.35 2.54 9.34 -- 1.48 1.58 -- -- -1.09 2.5 -15.02 47520 18.9 4.32
2652.57 2.41 9.41 -4.82 -- -- -- -- -1.42 -- -- -- -- --
3073.88 2.59 9.32 -- 1.74 -- -- -- -0.91 0.32 -- -- -- --
3111.75 2.6 9.33 -- -- 1.65 -- -- -1.07 -- -16.22 47520 18.9 4.52
3265.28 2.67 9.29 -- -- -- -- -- -0.889 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 1876.18 humidity 80 14400 < th dose independent rect. 18 13
4 1882.41 humidity 80 14400 > th dose independent rect. 17 14
19 1899.36 humidity 80 14400 < th dose independent sin 12 NA
23 1902.16 humidity 80 14400 < th dose dependent rect. 18 13
27 1905.11 humidity 80 14400 > th dose independent sin 11 NA
67 1929.81 radiation 40 14400 > th dose dependent rect. 12 1
105 1950.00 temperature 30 1440 > th dose independent rect. 10 2
116 1954.83 temperature 30 1440 < th dose independent rect. 10 2
174 1970.33 temperature 30 1440 < th dose independent rect. 18 18
182 1973.19 temperature 30 1440 < th dose independent rect. 4 8
185 1974.05 temperature 30 1440 < th dose independent rect. 6 6
188 1974.31 temperature 30 14400 > th dose independent rect. 18 15
204 1979.11 temperature 30 14400 < th dose independent rect. 1 8
209 1979.48 temperature 30 14400 < th dose independent rect. 22 11
212 1979.88 temperature 30 14400 < th dose independent rect. 6 3
220 1980.48 temperature 30 14400 < th dose independent rect. 8 1
229 1981.89 radiation 40 14400 < th dose independent rect. 12 1
231 1982.01 temperature 30 1440 > th dose independent rect. 18 18
235 1982.74 temperature 30 14400 > th dose independent rect. 8 1
280 1984.97 temperature 25 4320 > th dose dependent rect. 23 1
289 1988.07 radiation 40 14400 > th dose independent rect. 12 1
315 1992.78 temperature 30 14400 > th dose dependent rect. 8 1
345 1993.05 temperature 25 4320 > th dose dependent rect. 22 3
350 1993.47 humidity 90 14400 < th dose dependent rect. 20 1
382 1995.68 wind 9 14400 > th dose dependent rect. 13 2
430 1999.69 radiation 40 14400 < th dose independent rect. 12 7
432 1999.75 radiation 40 14400 < th dose independent rect. 12 19
439 1999.86 temperature 25 1440 > th dose independent rect. 1 7
450 2000.27 radiation 40 14400 > th dose dependent sin 15 NA
459 2001.35 wind 1 43200 > th dose independent rect. 10 1
460 2001.36 humidity 90 14400 < th dose dependent sin 11 NA
474 2003.33 radiation 40 14400 < th dose dependent rect. 1 5
492 2005.50 wind 5 43200 > th dose dependent rect. 8 1
556 2008.31 wind 1 43200 > th dose independent rect. 20 2
566 2009.03 humidity 80 14400 > th dose independent rect. 2 7
567 2009.10 radiation 1 14400 > th dose dependent rect. 4 2
625 2011.15 wind 1 43200 < th dose independent rect. 10 1
626 2011.18 humidity 50 14400 < th dose dependent rect. 17 17
693 2012.60 temperature 30 1440 < th dose independent sin 9 NA
707 2013.17 radiation 10 4320 > th dose dependent rect. 16 1
735 2013.74 radiation 20 4320 < th dose independent rect. 15 4
755 2013.95 radiation 20 4320 < th dose independent rect. 15 15
769 2014.52 radiation 20 4320 < th dose independent rect. 15 8
772 2014.55 atmosphere 1000 270 > th dose independent rect. 19 22
778 2014.88 radiation 20 4320 > th dose independent rect. 15 2
838 2016.49 radiation 40 14400 < th dose independent sin 16 NA
839 2016.49 radiation 20 14400 < th dose dependent rect. 18 13
871 2017.26 wind 1 43200 > th dose independent rect. 18 5
883 2017.81 radiation 1 14400 > th dose dependent rect. 18 13
889 2018.22 temperature 30 1440 > th dose independent sin 9 NA
918 2018.61 temperature 30 1440 < th dose independent rect. 17 1
919 2018.76 radiation 10 14400 < th dose independent rect. 6 1
970 2019.26 humidity 50 14400 < th dose independent rect. 17 17