Os03g0431500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0431500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.94 | 0.329 | 9.54 | -0.672 | 0.235 | -0.97 | -0.475 | 0.0267 | -0.517 | 7.89 | 26.19 | 4 | -- | -- |
| 48.88 | 0.328 | 9.54 | -0.665 | 0.233 | -0.969 | -0.48 | -- | -0.516 | 7.9 | 26.19 | 4 | -- | -- |
| 49.48 | 0.33 | 9.54 | -0.706 | 0.239 | -0.987 | -- | 0.13 | -0.528 | 7.4 | 26.38 | 2 | -- | -- |
| 49.51 | 0.328 | 9.54 | -0.686 | 0.239 | -0.995 | -- | -- | -0.523 | 7.4 | 26.32 | 2 | -- | -- |
| 52.46 | 0.339 | 9.54 | -0.701 | -- | -0.991 | -- | 0.118 | -0.522 | -- | 26.1 | 2 | -- | -- |
| 63.65 | 0.374 | 9.49 | -0.437 | 0.333 | -- | -0.407 | -- | -0.305 | 10.6 | -- | -- | -- | -- |
| 64.33 | 0.376 | 9.49 | -0.453 | 0.335 | -- | -- | -- | -0.306 | 10.8 | -- | -- | -- | -- |
| 52.48 | 0.339 | 9.54 | -0.682 | -- | -0.999 | -- | -- | -0.518 | -- | 26.05 | 2 | -- | -- |
| 60.86 | 0.363 | 9.51 | -- | 0.236 | -0.749 | -- | -- | -0.399 | 8.79 | 26.3 | 3 | -- | -- |
| 71.27 | 0.394 | 9.5 | -0.46 | -- | -- | -- | -- | -0.308 | -- | -- | -- | -- | -- |
| 69.74 | 0.391 | 9.48 | -- | 0.338 | -- | -- | -- | -0.256 | 10.9 | -- | -- | -- | -- |
| 63.94 | 0.374 | 9.52 | -- | -- | -0.797 | -- | -- | -0.406 | -- | 26.2 | 2 | -- | -- |
| 76.84 | 0.409 | 9.48 | -- | -- | -- | -- | -- | -0.257 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.21 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 2 | 49.33 | temperature | 30 | 90 | < th | dose dependent | sin | 8 | NA |
| 3 | 49.41 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 4 | 49.50 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 18 |
| 5 | 49.52 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 7 | 49.56 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 9 | 49.63 | temperature | 30 | 10 | < th | dose dependent | sin | 7 | NA |
| 15 | 49.73 | temperature | 20 | 90 | > th | dose dependent | sin | 9 | NA |
| 26 | 49.80 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 27 | 49.81 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 28 | 49.82 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 29 | 49.82 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 33 | 49.84 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 18 |
| 36 | 49.86 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 38 | 49.86 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 40 | 49.86 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 41 | 49.86 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 49 | 49.88 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 58 | 49.89 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 64 | 49.92 | temperature | 25 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 79 | 50.07 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 20 |
| 87 | 50.13 | temperature | 15 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 93 | 50.16 | temperature | 15 | 90 | > th | dose dependent | rect. | 17 | 22 |
| 98 | 50.20 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 323 | 51.31 | temperature | 20 | 10 | > th | dose independent | rect. | 17 | 23 |
| 340 | 51.41 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 9 |
| 390 | 51.55 | temperature | 25 | 90 | > th | dose independent | rect. | 17 | 22 |
| 461 | 51.79 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 16 |
| 489 | 51.90 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 18 |
| 533 | 52.03 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 21 |
| 590 | 52.21 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 16 |
| 616 | 52.28 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 9 |
| 756 | 52.63 | temperature | 25 | 90 | < th | dose independent | rect. | 11 | 22 |
| 762 | 52.64 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 848 | 52.84 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 956 | 53.05 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 23 |