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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0428200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Beta-caryophyllene synthase QHS1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.82 (0.0379) R2 : 0.000245
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0267 (0.0798) R2dN8 : 0.000316 R2N8 : 0.000245
σ : 0.714
deviance : 233.85
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
203.28 0.67 2.84 0.382 0.0254 3.55 0.267 7.18 0.0786 16.6 19.99 15 6.02 6.25
224.47 0.703 2.8 0.41 0.0157 1.08 0.345 -- 0.0906 11.5 19.99 15 6.02 6.25
203.44 0.664 2.84 0.382 0.0284 3.52 -- 7.12 0.0811 13.9 19.95 14 6.01 6.39
220.72 0.696 2.8 0.342 0.0476 1.73 -- -- 0.0899 14.5 19.88 11 5.99 5.86
203.5 0.664 2.84 0.384 -- 3.53 -- 7.15 0.0788 -- 19.96 16 6.02 6.29
230.68 0.712 2.81 0.326 0.0676 -- 0.105 -- 0.063 9.69 -- -- -- --
230.72 0.711 2.81 0.33 0.0675 -- -- -- 0.0631 9.51 -- -- -- --
216.04 0.685 2.8 0.357 -- 2.73 -- -- 0.0846 -- 19.89 14 6 5.69
219.38 0.69 2.81 -- 0.018 2.68 -- -- 0.0452 14.4 19.89 14 6 5.66
230.99 0.71 2.81 0.33 -- -- -- -- 0.0633 -- -- -- -- --
233.59 0.715 2.81 -- 0.0673 -- -- -- 0.0263 9.14 -- -- -- --
219.4 0.69 2.81 -- -- 2.68 -- -- 0.045 -- 19.92 13 6.01 5.68
233.85 0.714 2.82 -- -- -- -- -- 0.0267 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 203.36 temperature 20.0 10 < th dose independent rect. 6 6
3 203.39 temperature 20.0 10 < th dose independent rect. 6 3
25 203.58 temperature 20.0 30 < th dose dependent rect. 6 6
29 203.61 temperature 20.0 30 < th dose dependent rect. 6 3
50 203.90 temperature 20.0 10 < th dose independent rect. 8 2
56 203.90 temperature 20.0 10 < th dose dependent rect. 8 2
74 203.94 wind 5.0 10 > th dose independent rect. 8 1
81 203.94 wind 5.0 10 > th dose dependent rect. 8 1
152 206.56 wind 5.0 10 > th dose dependent rect. 3 6
176 208.43 temperature 25.0 270 < th dose dependent rect. 4 4
185 209.29 temperature 30.0 90 < th dose independent rect. 16 18
200 210.76 wind 5.0 10 > th dose independent rect. 3 6
207 211.07 temperature 30.0 10 < th dose dependent rect. 7 3
241 212.04 humidity 80.0 90 < th dose dependent rect. 6 1
242 212.07 radiation 10.0 90 < th dose independent rect. 7 2
246 212.29 humidity 60.0 270 > th dose independent rect. 16 16
248 212.62 radiation 20.0 270 < th dose independent rect. 15 17
252 212.78 wind 3.0 10 < th dose independent rect. 7 3
272 213.12 wind 3.0 90 > th dose dependent rect. 6 1
299 213.67 radiation 40.0 270 < th dose dependent rect. 15 17
304 213.81 wind 5.0 90 > th dose independent rect. 2 1
306 213.88 temperature 20.0 10 < th dose independent sin 23 NA
308 213.92 wind 5.0 90 > th dose dependent rect. 2 1
312 213.95 wind 5.0 90 < th dose independent rect. 16 18
313 213.96 humidity 80.0 90 < th dose independent rect. 6 1
316 214.00 temperature 20.0 10 > th dose independent sin 23 NA
321 214.07 radiation 1.0 90 > th dose independent rect. 10 20
332 214.26 temperature 30.0 90 < th dose dependent rect. 16 18
335 214.31 radiation 1.0 90 > th dose independent rect. 10 9
347 214.33 wind 3.0 10 > th dose independent rect. 3 1
348 214.33 wind 3.0 10 > th dose dependent rect. 3 1
356 214.35 wind 3.0 4320 > th dose dependent rect. 20 5
365 214.41 humidity 60.0 90 < th dose dependent rect. 9 1
385 214.46 atmosphere 1010.0 30 < th dose independent rect. 7 3
453 214.78 temperature 30.0 90 < th dose dependent rect. 6 14
456 214.79 wind 7.0 4320 < th dose dependent rect. 20 1
461 214.82 temperature 10.0 10 > th dose dependent rect. 10 21
464 214.85 humidity 60.0 90 < th dose independent rect. 9 1
515 215.09 wind 3.0 720 > th dose dependent rect. 22 6
521 215.11 temperature 10.0 1440 > th dose independent rect. 11 7
525 215.11 temperature 10.0 1440 > th dose independent rect. 18 17
530 215.13 radiation 10.0 270 < th dose independent rect. 5 2
548 215.20 temperature 30.0 270 < th dose independent rect. 16 2
587 215.36 atmosphere 995.0 270 > th dose independent rect. 16 16
591 215.39 temperature 30.0 10 < th dose independent rect. 7 3
607 215.43 wind 5.0 1440 > th dose dependent rect. 20 13
627 215.47 radiation 10.0 90 < th dose independent rect. 6 15
632 215.48 wind 9.0 4320 < th dose dependent rect. 20 5
633 215.49 humidity 90.0 10 > th dose independent rect. 9 11
635 215.52 wind 1.0 4320 > th dose dependent rect. 20 2
643 215.56 wind 3.0 10 < th dose independent rect. 16 4
656 215.61 wind 5.0 720 < th dose independent rect. 23 7
675 215.66 wind 5.0 720 > th dose independent rect. 21 7
678 215.67 radiation 10.0 270 < th dose dependent rect. 17 1
681 215.69 humidity 90.0 270 > th dose independent rect. 6 1
685 215.69 wind 9.0 4320 < th dose dependent rect. 19 8
693 215.73 precipitation 0.1 90 < th dose independent rect. 10 7
694 215.73 precipitation 0.1 90 < th dose dependent rect. 10 7
708 215.79 precipitation 0.1 270 < th dose independent rect. 8 8
710 215.79 wind 7.0 10 < th dose dependent rect. 7 3
711 215.79 precipitation 0.1 270 < th dose dependent rect. 8 8
737 215.88 temperature 10.0 270 > th dose independent rect. 8 8
738 215.88 atmosphere 1015.0 270 < th dose independent rect. 8 8
739 215.88 temperature 10.0 270 > th dose independent rect. 16 16
742 215.88 temperature 10.0 270 > th dose dependent rect. 20 9
759 215.94 atmosphere 995.0 30 > th dose independent rect. 17 17
766 215.96 wind 9.0 270 < th dose independent rect. 8 8
772 215.98 wind 5.0 1440 > th dose independent rect. 20 1
791 216.03 radiation 1.0 90 < th dose independent rect. 21 13
796 216.05 radiation 10.0 270 < th dose independent rect. 16 2
797 216.05 radiation 1.0 90 < th dose independent rect. 21 11
813 216.10 radiation 10.0 90 < th dose independent rect. 6 17
817 216.11 temperature 20.0 270 > th dose independent rect. 3 12
821 216.13 temperature 10.0 90 > th dose independent rect. 10 7
822 216.13 atmosphere 1015.0 90 < th dose independent rect. 10 7
827 216.15 radiation 1.0 10 > th dose independent rect. 7 3
829 216.16 wind 5.0 1440 < th dose independent rect. 20 8
840 216.20 humidity 60.0 270 > th dose independent rect. 19 10
841 216.20 wind 1.0 30 > th dose independent rect. 17 17
866 216.24 wind 9.0 90 < th dose independent rect. 10 7
868 216.24 radiation 1.0 270 > th dose independent rect. 8 8
869 216.24 temperature 10.0 270 > th dose independent rect. 19 10
870 216.24 temperature 30.0 270 < th dose independent rect. 19 10
872 216.24 atmosphere 995.0 270 > th dose independent rect. 19 10
873 216.24 radiation 20.0 270 < th dose independent rect. 19 10
876 216.24 temperature 10.0 270 > th dose independent rect. 5 14
877 216.24 atmosphere 1015.0 270 < th dose independent rect. 5 14
880 216.25 wind 5.0 1440 < th dose independent rect. 20 1
881 216.25 wind 9.0 270 < th dose independent rect. 19 10
883 216.25 precipitation 0.1 90 < th dose independent rect. 17 17
886 216.25 precipitation 0.1 90 < th dose dependent rect. 17 17
893 216.28 radiation 40.0 270 < th dose dependent rect. 19 10
894 216.28 radiation 10.0 270 < th dose dependent rect. 5 14
899 216.30 wind 5.0 4320 < th dose independent rect. 19 6
903 216.30 radiation 40.0 270 < th dose dependent rect. 5 3
933 216.38 wind 1.0 10 > th dose independent rect. 7 3
941 216.39 radiation 1.0 270 < th dose independent rect. 19 10
943 216.39 wind 9.0 270 < th dose independent rect. 5 14
965 216.47 humidity 80.0 270 < th dose dependent rect. 4 3