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Os03g0428000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.97 (0.0235) R2 : 0.597
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.53 (0.0592) R2dC : 0.599 R2C : 0.593
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0924 (0.0494) R2dN8 : 0.00399 R2N8 : -0.00178
σ : 0.443
deviance : 89.66
__
_____
C
peak time of C : 20.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
71.59 0.398 6.95 -0.0143 1.6 0.693 0.231 0.262 0.169 20.9 72 1239 -- --
71.73 0.394 6.95 0.0235 1.6 0.71 0.193 -- 0.179 20.9 71.91 1242 -- --
71.77 0.395 6.95 -0.0147 1.6 0.692 -- 0.212 0.171 20.9 71.83 1242 -- --
71.86 0.395 6.95 0.019 1.6 0.705 -- -- 0.181 20.9 71.88 1242 -- --
205.25 0.667 6.91 -0.0363 -- 0.91 -- 0.0794 0.144 -- 75.54 1428 -- --
89.21 0.443 6.97 -0.12 1.53 -- 0.122 -- 0.0786 20.6 -- -- -- --
89.25 0.442 6.97 -0.124 1.53 -- -- -- 0.0785 20.6 -- -- -- --
205.25 0.667 6.91 -0.0268 -- 0.914 -- -- 0.145 -- 75.57 1428 -- --
71.86 0.395 6.95 -- 1.6 0.702 -- -- 0.179 20.9 71.92 1242 -- --
221.52 0.695 6.93 -0.13 -- -- -- -- 0.0646 -- -- -- -- --
89.66 0.443 6.97 -- 1.53 -- -- -- 0.0924 20.6 -- -- -- --
205.27 0.667 6.91 -- -- 0.919 -- -- 0.149 -- 75.57 1426 -- --
221.97 0.695 6.93 -- -- -- -- -- 0.079 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 67.72 temperature 25 720 > th dose dependent rect. 18 5
29 70.75 humidity 70 14400 < th dose independent rect. 18 14
34 71.04 humidity 70 14400 < th dose independent rect. 18 1
63 71.47 humidity 70 14400 < th dose dependent rect. 17 2
64 71.51 humidity 60 1440 > th dose dependent rect. 10 3
66 71.65 humidity 80 1440 < th dose independent rect. 7 7
67 71.65 humidity 70 14400 > th dose independent rect. 18 14
70 71.71 humidity 70 14400 < th dose dependent rect. 17 14
71 71.72 humidity 70 14400 < th dose dependent rect. 17 5
83 71.76 humidity 60 1440 > th dose dependent rect. 11 1
99 71.95 humidity 70 14400 > th dose independent rect. 18 1
103 71.98 temperature 30 30 < th dose dependent sin 7 NA
107 72.06 humidity 60 1440 > th dose dependent rect. 9 5
126 72.17 temperature 20 10 > th dose dependent sin 7 NA
129 72.20 humidity 90 720 < th dose dependent rect. 18 3
133 72.27 temperature 20 90 > th dose dependent rect. 19 18
137 72.32 temperature 10 30 > th dose dependent sin 7 NA
140 72.35 temperature 20 270 > th dose dependent rect. 17 18
156 72.44 humidity 90 720 < th dose dependent rect. 17 5
158 72.47 humidity 80 1440 > th dose independent rect. 7 7
206 72.85 temperature 25 720 > th dose dependent sin 12 NA
270 73.15 humidity 70 1440 > th dose independent rect. 18 20
293 73.22 humidity 80 1440 < th dose independent rect. 11 1
309 73.24 temperature 30 14400 < th dose independent rect. 14 1
330 73.30 wind 3 43200 < th dose independent rect. 2 2
339 73.34 humidity 80 1440 > th dose independent rect. 11 1
353 73.35 humidity 70 1440 > th dose independent rect. 9 11
356 73.36 humidity 70 1440 > th dose independent rect. 9 22
357 73.36 temperature 20 14400 > th dose dependent rect. 19 1
363 73.37 humidity 70 1440 > th dose independent rect. 9 16
364 73.37 humidity 70 1440 > th dose independent rect. 9 18
375 73.39 humidity 50 14400 > th dose dependent rect. 18 1
394 73.46 humidity 70 1440 < th dose independent rect. 9 11
408 73.47 temperature 30 14400 > th dose independent rect. 14 1
428 73.50 temperature 30 14400 < th dose independent rect. 18 2
435 73.52 temperature 30 14400 < th dose independent rect. 18 14
438 73.52 humidity 90 1440 < th dose dependent rect. 9 5
439 73.53 temperature 25 14400 > th dose independent rect. 19 1
441 73.53 humidity 70 14400 < th dose dependent sin 12 NA
447 73.55 wind 3 43200 > th dose independent rect. 2 8
457 73.58 wind 3 43200 > th dose independent rect. 2 5
464 73.59 wind 3 43200 < th dose independent rect. 2 5
480 73.60 temperature 30 14400 < th dose independent rect. 18 11
495 73.63 wind 3 43200 < th dose independent rect. 2 8
507 73.66 humidity 60 14400 < th dose independent sin 13 NA
525 73.70 wind 3 43200 > th dose independent rect. 2 2
529 73.70 temperature 30 14400 < th dose independent rect. 18 9
538 73.71 temperature 30 14400 < th dose independent rect. 18 7
543 73.72 humidity 70 720 > th dose independent sin 12 NA
548 73.72 humidity 70 1440 > th dose independent rect. 15 23
568 73.74 humidity 50 1440 > th dose dependent rect. 7 15
574 73.75 humidity 80 14400 > th dose dependent rect. 21 1
577 73.76 humidity 70 1440 < th dose independent sin 16 NA
578 73.76 temperature 25 14400 < th dose independent rect. 10 1
582 73.76 humidity 70 1440 < th dose independent rect. 18 20
593 73.78 temperature 25 14400 > th dose independent rect. 10 1
599 73.78 humidity 50 1440 > th dose dependent sin 0 NA
601 73.78 humidity 60 720 > th dose dependent rect. 17 6
629 73.80 humidity 50 1440 > th dose dependent rect. 7 12
631 73.81 temperature 30 14400 < th dose independent rect. 14 5
636 73.81 temperature 30 14400 < th dose independent rect. 14 15
637 73.81 temperature 30 14400 < th dose independent rect. 14 17
687 73.86 temperature 30 14400 < th dose dependent rect. 19 1
690 73.86 wind 1 43200 < th dose dependent rect. 24 4
693 73.87 humidity 60 14400 > th dose independent sin 13 NA
694 73.87 humidity 70 720 < th dose independent rect. 18 2
716 73.88 temperature 25 720 > th dose independent rect. 17 6
718 73.88 humidity 70 1440 < th dose independent rect. 15 22
725 73.88 temperature 25 1440 > th dose dependent rect. 9 14
750 73.90 humidity 70 1440 > th dose independent rect. 13 23
765 73.91 humidity 70 720 > th dose independent rect. 15 9
773 73.92 humidity 80 1440 < th dose independent sin 1 NA
774 73.92 humidity 80 43200 < th dose independent rect. 22 1
775 73.92 temperature 30 14400 > th dose independent rect. 14 5
799 73.93 humidity 80 43200 < th dose independent rect. 4 1
806 73.93 radiation 20 1440 > th dose dependent rect. 16 16
837 73.94 temperature 30 90 < th dose dependent rect. 23 12
845 73.95 temperature 25 720 > th dose independent rect. 18 4
865 73.96 humidity 70 1440 > th dose independent rect. 6 14
866 73.96 humidity 70 1440 > th dose independent rect. 4 16
920 73.98 humidity 70 1440 > th dose independent no NA NA
953 73.98 temperature 25 1440 > th dose dependent sin 21 NA
981 73.99 wind 3 43200 > th dose dependent rect. 6 1
994 73.99 temperature 25 1440 > th dose dependent rect. 13 10