Os03g0423200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0423200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 109.59 | 0.492 | 9.16 | -0.842 | 0.475 | 1.37 | -1.1 | -1.09 | -0.784 | 6.28 | 18.67 | 266 | -- | -- |
| 110.27 | 0.489 | 9.14 | -0.658 | 0.466 | 1.44 | -0.914 | -- | -0.727 | 6.53 | 16.68 | 289 | -- | -- |
| 111.76 | 0.492 | 9.15 | -0.742 | 0.486 | 1.49 | -- | -0.307 | -0.757 | 5.54 | 17.68 | 235 | -- | -- |
| 111.81 | 0.492 | 9.14 | -0.687 | 0.48 | 1.52 | -- | -- | -0.736 | 5.54 | 17.01 | 236 | -- | -- |
| 119.14 | 0.508 | 9.14 | -0.645 | -- | 1.15 | -- | -0.415 | -0.686 | -- | 16.99 | 90 | -- | -- |
| 138.6 | 0.552 | 9.1 | -0.308 | 0.102 | -- | -1.2 | -- | -0.502 | 8.13 | -- | -- | -- | -- |
| 142.25 | 0.559 | 9.09 | -0.338 | 0.144 | -- | -- | -- | -0.498 | 11.5 | -- | -- | -- | -- |
| 119.24 | 0.509 | 9.14 | -0.591 | -- | 1.25 | -- | -- | -0.672 | -- | 15.2 | 91 | -- | -- |
| 121.2 | 0.513 | 9.11 | -- | 0.477 | 1.21 | -- | -- | -0.575 | 4.75 | 24.2 | 102 | -- | -- |
| 143.56 | 0.56 | 9.1 | -0.342 | -- | -- | -- | -- | -0.5 | -- | -- | -- | -- | -- |
| 145.26 | 0.564 | 9.09 | -- | 0.148 | -- | -- | -- | -0.46 | 11.6 | -- | -- | -- | -- |
| 127.26 | 0.527 | 9.12 | -- | -- | 0.907 | -- | -- | -0.588 | -- | 19.46 | 90 | -- | -- |
| 146.64 | 0.565 | 9.09 | -- | -- | -- | -- | -- | -0.462 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 105.75 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 3 | 106.18 | temperature | 20.0 | 720 | > th | dose dependent | sin | 4 | NA |
| 7 | 106.42 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 24 | 107.19 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 25 | 107.25 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 10 |
| 26 | 107.26 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 30 | 107.39 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 39 | 107.55 | temperature | 10.0 | 720 | > th | dose dependent | sin | 4 | NA |
| 48 | 107.78 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 53 | 107.85 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 54 | 107.85 | temperature | 30.0 | 720 | < th | dose dependent | sin | 5 | NA |
| 64 | 107.95 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 71 | 108.06 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 91 | 108.25 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 94 | 108.30 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 98 | 108.35 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 23 | 15 |
| 107 | 108.49 | temperature | 20.0 | 720 | > th | dose dependent | sin | 8 | NA |
| 108 | 108.50 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 13 |
| 129 | 108.66 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 3 | 10 |
| 163 | 108.87 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 183 | 109.02 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 3 | 8 |
| 195 | 109.12 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 212 | 109.19 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 213 | 109.20 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 214 | 109.20 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 222 | 109.23 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 223 | 109.24 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 235 | 109.30 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 238 | 109.30 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 239 | 109.31 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 254 | 109.38 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 5 | 6 |
| 260 | 109.40 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 6 |
| 272 | 109.46 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 327 | 109.69 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 334 | 109.71 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 341 | 109.75 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 360 | 109.84 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 11 |
| 368 | 109.88 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 6 | 16 |
| 374 | 109.90 | temperature | 20.0 | 270 | > th | dose dependent | no | NA | NA |
| 414 | 110.06 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 444 | 110.14 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 448 | 110.15 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 479 | 110.29 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 480 | 110.29 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 553 | 110.53 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 593 | 110.64 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 618 | 110.71 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 682 | 110.89 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 765 | 111.06 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 23 | NA |
| 852 | 111.23 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 22 | NA |