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Os03g0422800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Curculin-like (mannose-binding) lectin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.67 (0.0377) R2 : 0.466
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.16 (0.0964) R2dC : 0.184 R2C : 0.27
β3 : 2.05 (0.183) R2dE : 0.169 R2E : 0.276
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.202 (0.0816) R2dN8 : 0.00975 R2N8 : 0.0238
σ : 0.703
deviance : 227.94
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C
peak time of C : 21.1
E
wheather : temperature
threshold : -78.63
memory length : 360
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
210.34 0.681 6.66 0.547 1.27 1.88 1.73 -0.398 0.269 21.4 9.702 280 -- --
210.45 0.676 6.65 0.606 1.26 1.88 1.73 -- 0.285 21.5 8.105 282 -- --
219.67 0.69 6.6 0.871 1.15 1.59 -- 1.73 0.389 20.3 -0.5965 538 -- --
220.41 0.691 6.65 0.564 1.2 1.78 -- -- 0.295 20.9 -87.64 368 -- --
275.61 0.773 6.61 0.65 -- 2.63 -- 1.92 0.228 -- -12.54 584 -- --
247.18 0.737 6.6 0.994 1.56 -- 1.62 -- 0.55 20.2 -- -- -- --
254.63 0.747 6.6 0.951 1.57 -- -- -- 0.553 19.9 -- -- -- --
278.34 0.777 6.65 0.316 -- 2.68 -- -- 0.141 -- 7.793 566 -- --
227.94 0.703 6.67 -- 1.16 2.05 -- -- 0.202 21.1 -78.63 360 -- --
388.95 0.922 6.56 0.934 -- -- -- -- 0.533 -- -- -- -- --
278.46 0.781 6.62 -- 1.56 -- -- -- 0.447 20 -- -- -- --
280.75 0.78 6.66 -- -- 2.79 -- -- 0.0916 -- 11.56 575 -- --
411.98 0.947 6.58 -- -- -- -- -- 0.429 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 202.61 radiation 10.0 4320 > th dose independent rect. 16 15
5 206.45 radiation 1.0 4320 < th dose independent rect. 18 12
6 206.51 radiation 40.0 4320 < th dose dependent rect. 5 1
9 206.54 radiation 40.0 4320 < th dose dependent rect. 20 10
12 206.63 radiation 40.0 4320 < th dose dependent rect. 3 3
16 206.70 radiation 40.0 4320 < th dose dependent rect. 22 8
35 206.98 radiation 10.0 4320 < th dose dependent rect. 1 5
47 207.30 radiation 1.0 43200 > th dose independent rect. 18 1
57 207.32 radiation 1.0 43200 < th dose independent rect. 18 5
61 207.33 radiation 1.0 43200 < th dose independent rect. 18 1
65 207.34 radiation 1.0 43200 < th dose independent rect. 18 10
73 207.55 temperature 15.0 270 > th dose dependent rect. 14 23
76 207.74 radiation 1.0 14400 > th dose independent rect. 4 3
87 207.77 radiation 1.0 14400 < th dose independent rect. 22 9
91 207.79 radiation 1.0 14400 < th dose independent rect. 3 4
98 207.82 temperature 15.0 90 > th dose dependent rect. 17 16
107 207.93 temperature 15.0 90 > th dose dependent rect. 17 14
111 207.99 temperature 10.0 270 > th dose dependent rect. 22 23
114 208.07 precipitation 0.1 43200 > th dose independent rect. 24 7
115 208.11 temperature 10.0 270 > th dose dependent rect. 5 14
116 208.17 precipitation 0.1 43200 > th dose independent rect. 22 9
118 208.20 precipitation 0.1 43200 < th dose independent rect. 24 7
119 208.20 precipitation 0.1 43200 < th dose dependent rect. 24 7
120 208.24 humidity 60.0 14400 > th dose dependent rect. 6 1
128 208.33 precipitation 0.1 43200 < th dose independent rect. 22 9
130 208.33 precipitation 0.1 43200 < th dose dependent rect. 22 9
131 208.37 temperature 30.0 90 < th dose independent sin 11 NA
132 208.37 precipitation 0.1 43200 > th dose independent rect. 24 9
142 208.44 precipitation 0.1 43200 < th dose independent rect. 24 9
143 208.44 precipitation 0.1 43200 < th dose dependent rect. 24 9
145 208.50 radiation 1.0 4320 > th dose dependent rect. 5 1
147 208.50 radiation 1.0 4320 > th dose dependent rect. 18 12
152 208.55 precipitation 0.1 43200 > th dose dependent rect. 22 9
163 208.57 precipitation 0.1 43200 > th dose independent rect. 1 4
164 208.59 precipitation 0.1 43200 > th dose dependent rect. 24 7
168 208.63 precipitation 0.1 43200 > th dose dependent rect. 22 11
174 208.68 temperature 15.0 270 > th dose dependent rect. 15 16
188 208.76 radiation 20.0 4320 < th dose dependent rect. 17 1
193 208.77 precipitation 0.1 43200 > th dose dependent rect. 24 9
197 208.81 temperature 15.0 270 > th dose dependent rect. 12 23
206 208.87 radiation 1.0 4320 > th dose independent rect. 17 2
301 209.12 temperature 20.0 270 > th dose dependent rect. 14 21
306 209.17 precipitation 0.1 43200 > th dose independent sin 8 NA
311 209.21 precipitation 0.1 43200 < th dose independent sin 8 NA
313 209.21 precipitation 0.1 43200 < th dose dependent sin 8 NA
349 209.37 radiation 10.0 4320 > th dose dependent rect. 16 15
354 209.40 radiation 30.0 4320 > th dose independent rect. 15 17
355 209.41 precipitation 0.1 43200 > th dose dependent sin 8 NA
368 209.47 radiation 1.0 43200 < th dose dependent rect. 18 1
369 209.47 radiation 1.0 43200 < th dose dependent rect. 18 5
382 209.51 radiation 1.0 14400 > th dose independent sin 9 NA
442 209.60 wind 1.0 14400 < th dose dependent rect. 20 4
459 209.66 wind 1.0 14400 > th dose independent rect. 21 2
464 209.68 radiation 1.0 14400 < th dose independent sin 8 NA
516 209.74 temperature 15.0 270 > th dose dependent rect. 3 23
523 209.75 temperature 15.0 270 > th dose dependent rect. 1 23
591 209.90 temperature 10.0 270 > th dose dependent sin 18 NA
603 209.92 precipitation 0.1 43200 > th dose independent rect. 17 15
604 209.92 precipitation 0.1 43200 < th dose independent rect. 17 15
607 209.92 precipitation 0.1 43200 < th dose dependent rect. 17 15
635 209.98 radiation 1.0 14400 > th dose independent rect. 18 23
646 210.01 radiation 20.0 4320 < th dose dependent rect. 16 15
653 210.03 radiation 1.0 14400 > th dose independent rect. 4 13
660 210.03 radiation 1.0 14400 < th dose independent rect. 22 19
669 210.04 radiation 1.0 14400 < th dose independent rect. 3 14
695 210.09 temperature 30.0 720 < th dose independent rect. 19 18
731 210.18 radiation 20.0 4320 > th dose dependent rect. 15 17
738 210.20 temperature 15.0 270 > th dose dependent sin 16 NA
751 210.22 radiation 20.0 4320 < th dose dependent rect. 17 6
791 210.30 radiation 1.0 14400 < th dose independent rect. 15 16
792 210.30 radiation 20.0 4320 < th dose dependent rect. 17 9
811 210.35 radiation 20.0 4320 < th dose dependent rect. 17 4
822 210.37 temperature 10.0 270 > th dose dependent no NA NA
827 210.38 radiation 1.0 4320 > th dose dependent rect. 17 1
948 210.53 wind 1.0 14400 < th dose independent rect. 21 2
958 210.55 radiation 1.0 4320 < th dose independent rect. 17 7
978 210.57 radiation 1.0 4320 < th dose independent rect. 17 9
987 210.58 radiation 1.0 4320 < th dose independent rect. 17 2