Os03g0422600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0422600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.58 | 0.324 | 3.26 | 0.213 | 0.138 | 3.73 | 0.104 | 7.85 | -0.0666 | 10.7 | 18.96 | 261 | -- | -- |
| 50.76 | 0.334 | 3.2 | 0.0996 | 0.142 | 0.144 | 0.186 | -- | -0.0812 | 9.5 | 15.04 | 1141 | -- | -- |
| 47.49 | 0.321 | 3.26 | 0.214 | 0.142 | 4.13 | -- | 8.67 | -0.0617 | 10.8 | 18.82 | 260 | -- | -- |
| 50.52 | 0.331 | 3.2 | 0.148 | 0.12 | 0.159 | -- | -- | -0.0619 | 10.2 | 25.09 | 677 | -- | -- |
| 48.52 | 0.324 | 3.27 | 0.22 | -- | 5.3 | -- | 11.2 | -0.0672 | -- | 18.61 | 260 | -- | -- |
| 50.8 | 0.334 | 3.2 | 0.0934 | 0.14 | -- | 0.204 | -- | -0.0826 | 9.45 | -- | -- | -- | -- |
| 50.94 | 0.334 | 3.2 | 0.101 | 0.138 | -- | -- | -- | -0.0821 | 9.76 | -- | -- | -- | -- |
| 51.12 | 0.333 | 3.2 | 0.168 | -- | 0.238 | -- | -- | -0.0303 | -- | 27.7 | 755 | -- | -- |
| 51.01 | 0.333 | 3.2 | -- | 0.122 | 0.11 | -- | -- | -0.0739 | 9.66 | 25.2 | 680 | -- | -- |
| 52.08 | 0.337 | 3.21 | 0.1 | -- | -- | -- | -- | -0.0819 | -- | -- | -- | -- | -- |
| 51.21 | 0.335 | 3.21 | -- | 0.138 | -- | -- | -- | -0.0934 | 9.7 | -- | -- | -- | -- |
| 51.78 | 0.335 | 3.2 | -- | -- | 0.172 | -- | -- | -0.0614 | -- | 27.8 | 737 | -- | -- |
| 52.35 | 0.338 | 3.21 | -- | -- | -- | -- | -- | -0.093 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.64 | humidity | 80 | 90 | < th | dose dependent | rect. | 7 | 1 |
| 13 | 37.63 | humidity | 80 | 30 | < th | dose dependent | rect. | 2 | 6 |
| 16 | 38.64 | wind | 5 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 20 | 38.65 | wind | 5 | 90 | > th | dose independent | rect. | 6 | 2 |
| 25 | 38.73 | radiation | 20 | 90 | > th | dose independent | rect. | 6 | 1 |
| 39 | 38.73 | radiation | 20 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 62 | 39.20 | humidity | 80 | 30 | < th | dose dependent | rect. | 24 | 8 |
| 64 | 39.23 | wind | 5 | 30 | > th | dose dependent | rect. | 1 | 7 |
| 78 | 39.65 | humidity | 80 | 90 | < th | dose independent | rect. | 7 | 1 |
| 83 | 40.00 | wind | 5 | 10 | > th | dose independent | rect. | 1 | 7 |
| 85 | 40.02 | wind | 5 | 10 | > th | dose independent | rect. | 3 | 5 |
| 90 | 40.07 | wind | 5 | 10 | > th | dose independent | rect. | 7 | 1 |
| 119 | 41.59 | humidity | 80 | 10 | < th | dose independent | rect. | 6 | 2 |
| 353 | 44.91 | temperature | 20 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 490 | 45.67 | temperature | 20 | 90 | < th | dose independent | rect. | 6 | 1 |
| 550 | 45.82 | wind | 1 | 10 | < th | dose independent | rect. | 7 | 1 |
| 552 | 45.82 | wind | 1 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 678 | 45.89 | radiation | 10 | 10 | < th | dose independent | sin | 11 | NA |
| 682 | 45.90 | radiation | 10 | 10 | > th | dose independent | sin | 11 | NA |
| 707 | 45.93 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 7 | 1 |
| 715 | 45.93 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 788 | 46.13 | temperature | 25 | 10 | < th | dose dependent | rect. | 6 | 2 |
| 887 | 46.55 | radiation | 30 | 90 | < th | dose dependent | sin | 11 | NA |
| 910 | 46.59 | wind | 1 | 720 | < th | dose independent | rect. | 20 | 1 |
| 951 | 46.64 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 7 | 2 |
| 974 | 46.74 | wind | 1 | 720 | < th | dose dependent | rect. | 19 | 3 |