Os03g0418600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0418600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.33 | 0.38 | 9.59 | 0.162 | 0.71 | 0.426 | -0.308 | 0.799 | 0.395 | 23.3 | 22.1 | 329 | -- | -- |
| 67.86 | 0.384 | 9.6 | -0.063 | 0.655 | 0.523 | -0.517 | -- | 0.329 | 23.4 | 21.2 | 428 | -- | -- |
| 65.61 | 0.377 | 9.59 | 0.195 | 0.729 | 0.418 | -- | 0.867 | 0.401 | 23.3 | 22.07 | 279 | -- | -- |
| 68.26 | 0.385 | 9.61 | -0.106 | 0.678 | 0.494 | -- | -- | 0.337 | 23.4 | 21.3 | 341 | -- | -- |
| 89.58 | 0.441 | 9.58 | 0.0522 | -- | 0.629 | -- | 0.688 | 0.335 | -- | 21.84 | 767 | -- | -- |
| 77.65 | 0.413 | 9.58 | 0.0325 | 0.674 | -- | -0.526 | -- | 0.47 | 22.9 | -- | -- | -- | -- |
| 78.82 | 0.416 | 9.58 | 0.0541 | 0.677 | -- | -- | -- | 0.472 | 22.9 | -- | -- | -- | -- |
| 91.24 | 0.445 | 9.59 | -0.128 | -- | 0.581 | -- | -- | 0.306 | -- | 21.9 | 773 | -- | -- |
| 68.52 | 0.386 | 9.61 | -- | 0.683 | 0.476 | -- | -- | 0.355 | 23.4 | 21.2 | 339 | -- | -- |
| 107.28 | 0.484 | 9.56 | 0.0687 | -- | -- | -- | -- | 0.476 | -- | -- | -- | -- | -- |
| 78.89 | 0.415 | 9.58 | -- | 0.677 | -- | -- | -- | 0.466 | 22.9 | -- | -- | -- | -- |
| 91.62 | 0.446 | 9.6 | -- | -- | 0.582 | -- | -- | 0.307 | -- | 21.95 | 764 | -- | -- |
| 107.4 | 0.484 | 9.57 | -- | -- | -- | -- | -- | 0.469 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.97 | humidity | 90 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 11 | 63.09 | wind | 3 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 13 | 63.21 | wind | 3 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 15 | 63.30 | humidity | 80 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 19 | 63.39 | wind | 3 | 14400 | > th | dose independent | rect. | 2 | 5 |
| 29 | 63.51 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 17 |
| 30 | 63.52 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 34 | 63.54 | wind | 3 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 41 | 63.60 | wind | 3 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 49 | 63.67 | humidity | 80 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 53 | 63.71 | wind | 3 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 61 | 63.72 | humidity | 80 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 66 | 63.74 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 67 | 63.75 | wind | 3 | 14400 | < th | dose dependent | rect. | 24 | 2 |
| 68 | 63.76 | humidity | 80 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 71 | 63.76 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 72 | 63.76 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 11 |
| 77 | 63.79 | wind | 3 | 14400 | < th | dose independent | sin | 10 | NA |
| 92 | 63.85 | wind | 3 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 101 | 63.87 | wind | 3 | 14400 | < th | dose dependent | sin | 9 | NA |
| 115 | 63.91 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 191 | 64.17 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 8 |
| 196 | 64.20 | wind | 3 | 14400 | > th | dose independent | sin | 10 | NA |
| 217 | 64.26 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 228 | 64.29 | wind | 3 | 14400 | < th | dose dependent | rect. | 3 | 10 |
| 289 | 64.46 | wind | 3 | 14400 | < th | dose dependent | rect. | 3 | 5 |
| 300 | 64.49 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 14 |
| 315 | 64.53 | wind | 3 | 14400 | < th | dose independent | rect. | 21 | 17 |
| 329 | 64.58 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 15 |
| 367 | 64.70 | temperature | 25 | 270 | < th | dose dependent | rect. | 20 | 21 |
| 371 | 64.71 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 417 | 64.80 | humidity | 70 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 438 | 64.84 | wind | 3 | 14400 | > th | dose independent | rect. | 24 | 14 |
| 536 | 65.09 | wind | 1 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 574 | 65.16 | wind | 1 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 583 | 65.18 | wind | 1 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 650 | 65.31 | wind | 1 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 677 | 65.37 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 22 |
| 713 | 65.46 | wind | 1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 774 | 65.57 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 18 |
| 779 | 65.58 | wind | 3 | 14400 | < th | dose dependent | rect. | 9 | 23 |
| 788 | 65.60 | wind | 3 | 14400 | < th | dose dependent | rect. | 11 | 23 |
| 798 | 65.63 | wind | 3 | 14400 | < th | dose dependent | no | NA | NA |
| 884 | 65.77 | wind | 3 | 14400 | < th | dose dependent | rect. | 3 | 23 |
| 890 | 65.78 | wind | 3 | 14400 | < th | dose dependent | rect. | 24 | 23 |
| 891 | 65.79 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 917 | 65.82 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 919 | 65.82 | temperature | 30 | 90 | < th | dose dependent | sin | 7 | NA |
| 931 | 65.84 | temperature | 25 | 270 | < th | dose dependent | sin | 9 | NA |
| 943 | 65.87 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 22 |
| 954 | 65.89 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 967 | 65.91 | temperature | 20 | 90 | > th | dose dependent | sin | 7 | NA |