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Os03g0413400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glycosyl transferase, family 8 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.5 (0.0201) R2 : 0.0331
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.167 (0.0423) R2dN8 : 0.0427 R2N8 : 0.0331
σ : 0.379
deviance : 65.81
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
30.49 0.259 10.5 0.571 0.476 -0.368 -0.438 -0.0733 -0.121 5.51 0.09322 11 -- --
30.52 0.257 10.5 0.572 0.477 -0.369 -0.453 -- -0.121 5.46 0.1465 11 -- --
30.93 0.259 10.5 0.565 0.476 -0.402 -- -0.082 -0.123 5.13 0.07002 11 -- --
30.97 0.259 10.5 0.564 0.475 -0.403 -- -- -0.121 5.12 0.07349 11 -- --
42.21 0.304 10.5 0.59 -- -0.353 -- -0.0272 -0.123 -- 0.07002 11 -- --
34.27 0.274 10.5 0.613 0.622 -- -0.317 -- -0.107 8.29 -- -- -- --
34.57 0.275 10.5 0.604 0.622 -- -- -- -0.106 8.35 -- -- -- --
42.14 0.302 10.5 0.588 -- -0.359 -- -- -0.12 -- 0.04 7 -- --
39.65 0.293 10.5 -- 0.471 -0.405 -- -- -0.122 5.07 0.06803 12 -- --
56.06 0.35 10.5 0.608 -- -- -- -- -0.0998 -- -- -- -- --
44.2 0.311 10.5 -- 0.625 -- -- -- -0.174 8.28 -- -- -- --
51.25 0.333 10.6 -- -- -0.361 -- -- -0.167 -- 0.003787 6 -- --
65.81 0.379 10.5 -- -- -- -- -- -0.167 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 27.41 radiation 1.0 270 > th dose independent rect. 7 3
4 27.47 humidity 90.0 30 < th dose independent rect. 7 5
6 27.52 temperature 15.0 270 > th dose independent rect. 6 5
7 27.55 temperature 10.0 30 > th dose dependent rect. 7 5
13 27.64 temperature 15.0 270 > th dose independent rect. 7 3
14 27.69 temperature 10.0 270 > th dose dependent rect. 7 3
17 27.81 radiation 1.0 270 < th dose independent sin 7 NA
18 27.81 wind 7.0 270 < th dose independent rect. 7 3
21 27.82 temperature 15.0 90 > th dose independent rect. 12 19
22 27.83 wind 7.0 270 < th dose independent rect. 6 5
25 27.84 radiation 1.0 270 < th dose dependent sin 6 NA
26 27.85 precipitation 0.1 270 < th dose independent rect. 7 3
27 27.85 precipitation 0.1 270 < th dose dependent rect. 7 3
34 27.89 atmosphere 995.0 270 > th dose independent rect. 7 3
35 27.89 atmosphere 1015.0 270 < th dose independent rect. 7 3
37 27.89 precipitation 0.1 270 < th dose independent rect. 6 5
38 27.89 temperature 10.0 270 > th dose independent rect. 10 21
40 27.89 precipitation 0.1 270 < th dose dependent rect. 6 5
44 27.90 humidity 50.0 270 > th dose independent rect. 7 2
48 27.90 radiation 1.0 30 > th dose independent rect. 12 19
53 27.93 atmosphere 995.0 270 > th dose independent rect. 6 5
54 27.93 atmosphere 1015.0 270 < th dose independent rect. 6 5
56 27.93 wind 9.0 270 < th dose dependent rect. 7 2
78 27.98 humidity 50.0 270 > th dose independent rect. 6 5
84 28.01 precipitation 0.1 270 < th dose independent rect. 16 10
85 28.01 precipitation 0.1 270 < th dose dependent rect. 16 10
89 28.04 radiation 1.0 270 < th dose dependent rect. 2 10
101 28.09 radiation 30.0 270 < th dose independent rect. 15 11
102 28.10 temperature 30.0 270 < th dose independent rect. 7 2
107 28.12 wind 9.0 270 < th dose independent rect. 16 10
108 28.13 radiation 1.0 270 > th dose independent sin 6 NA
114 28.19 wind 9.0 270 < th dose dependent rect. 6 5
116 28.20 radiation 40.0 270 < th dose dependent rect. 15 11
117 28.23 radiation 40.0 270 < th dose independent rect. 7 2
118 28.23 atmosphere 995.0 270 > th dose independent rect. 11 19
129 28.28 wind 9.0 10 < th dose independent rect. 7 5
132 28.28 radiation 40.0 90 < th dose independent rect. 12 19
137 28.30 temperature 10.0 270 > th dose independent rect. 16 10
139 28.30 temperature 10.0 270 > th dose independent rect. 2 14
140 28.30 atmosphere 1015.0 270 < th dose independent rect. 2 14
142 28.31 radiation 1.0 270 < th dose independent rect. 2 10
144 28.31 wind 9.0 90 < th dose independent rect. 12 19
167 28.34 precipitation 0.1 270 < th dose independent rect. 11 19
168 28.34 precipitation 0.1 270 < th dose dependent rect. 11 19
173 28.37 atmosphere 1010.0 90 < th dose independent rect. 12 19
178 28.38 wind 1.0 10 > th dose independent rect. 7 5
183 28.39 temperature 10.0 1440 > th dose independent rect. 8 5
187 28.39 atmosphere 995.0 1440 > th dose independent rect. 8 5
190 28.39 temperature 10.0 1440 > th dose independent rect. 13 19
197 28.40 atmosphere 995.0 270 > th dose independent rect. 10 21
203 28.41 wind 9.0 270 < th dose independent rect. 10 21
212 28.43 precipitation 0.1 270 < th dose independent rect. 10 21
214 28.43 precipitation 0.1 270 < th dose dependent rect. 10 21
217 28.44 precipitation 0.1 270 < th dose independent rect. 2 14
218 28.44 precipitation 0.1 270 < th dose dependent rect. 2 14
224 28.46 precipitation 0.1 10 < th dose independent rect. 12 19
228 28.46 precipitation 0.1 10 < th dose dependent rect. 12 19
230 28.47 humidity 90.0 270 < th dose independent rect. 7 3
244 28.51 wind 9.0 270 < th dose independent rect. 6 19
252 28.52 humidity 70.0 90 > th dose dependent rect. 4 3
271 28.55 wind 1.0 270 > th dose independent rect. 7 3
294 28.59 atmosphere 1010.0 90 < th dose independent rect. 4 3
307 28.61 temperature 30.0 270 < th dose independent rect. 6 4
316 28.63 atmosphere 995.0 270 > th dose independent rect. 2 14
327 28.65 precipitation 0.1 270 < th dose independent rect. 6 19
329 28.65 precipitation 0.1 270 < th dose dependent rect. 6 19
331 28.66 radiation 1.0 270 < th dose independent rect. 2 4
340 28.68 humidity 50.0 270 > th dose independent rect. 16 10
369 28.73 atmosphere 1015.0 90 < th dose dependent rect. 4 3
373 28.74 wind 9.0 270 < th dose independent rect. 6 15
394 28.78 wind 9.0 90 < th dose dependent rect. 4 3
395 28.78 radiation 30.0 90 < th dose dependent rect. 4 3
430 28.83 precipitation 0.1 270 < th dose independent rect. 6 15
431 28.83 radiation 1.0 10 < th dose dependent sin 13 NA
433 28.83 humidity 50.0 270 > th dose dependent rect. 1 5
434 28.83 precipitation 0.1 270 < th dose dependent rect. 6 15
436 28.84 atmosphere 1010.0 10 < th dose independent rect. 5 2
441 28.84 wind 9.0 270 < th dose independent rect. 1 5
442 28.84 temperature 10.0 270 > th dose independent rect. 1 5
444 28.84 temperature 30.0 270 < th dose independent rect. 1 5
445 28.84 humidity 50.0 270 > th dose independent rect. 1 5
448 28.84 atmosphere 995.0 270 > th dose independent rect. 1 5
449 28.84 atmosphere 1010.0 270 < th dose independent rect. 1 5
451 28.84 radiation 20.0 270 < th dose independent rect. 1 5
455 28.84 temperature 10.0 270 > th dose independent rect. 6 19
460 28.85 radiation 10.0 90 < th dose independent rect. 4 3
463 28.85 temperature 30.0 90 < th dose independent rect. 18 10
465 28.85 radiation 30.0 270 < th dose dependent rect. 1 5
469 28.86 precipitation 0.1 270 < th dose independent rect. 1 5
472 28.86 precipitation 0.1 270 < th dose dependent rect. 1 5
473 28.87 atmosphere 995.0 90 > th dose independent rect. 7 21
477 28.88 wind 7.0 90 < th dose independent rect. 4 3
479 28.88 temperature 10.0 90 > th dose independent rect. 4 3
481 28.88 temperature 30.0 90 < th dose independent rect. 4 3
482 28.88 humidity 50.0 90 > th dose independent rect. 4 3
484 28.88 atmosphere 995.0 90 > th dose independent rect. 4 3
491 28.88 wind 7.0 90 < th dose independent rect. 18 10
493 28.88 temperature 10.0 90 > th dose independent rect. 7 21
499 28.89 precipitation 0.1 90 < th dose independent rect. 4 3
502 28.89 precipitation 0.1 90 < th dose dependent rect. 4 3
506 28.89 wind 9.0 90 < th dose dependent rect. 7 21
508 28.90 wind 9.0 270 < th dose independent rect. 2 14
515 28.91 wind 9.0 10 < th dose independent rect. 7 22
523 28.93 temperature 15.0 270 > th dose independent rect. 21 9
547 28.94 wind 7.0 270 < th dose independent rect. 18 16
560 28.95 humidity 80.0 30 < th dose independent rect. 23 13
575 28.96 temperature 30.0 270 < th dose dependent rect. 2 3
584 28.97 humidity 60.0 10 > th dose dependent rect. 5 2
592 28.98 humidity 60.0 90 > th dose independent rect. 18 10
596 28.98 wind 9.0 270 < th dose dependent rect. 2 4
615 29.01 wind 9.0 270 < th dose dependent rect. 16 9
635 29.02 humidity 80.0 30 < th dose independent rect. 1 11
649 29.03 radiation 1.0 90 < th dose independent rect. 18 10
683 29.06 atmosphere 995.0 270 > th dose independent rect. 16 10
695 29.07 atmosphere 1015.0 10 < th dose dependent rect. 5 2
697 29.07 temperature 30.0 90 < th dose dependent rect. 4 3
698 29.07 temperature 30.0 270 < th dose dependent rect. 1 5
710 29.09 wind 1.0 270 > th dose independent rect. 11 19
713 29.09 atmosphere 995.0 10 > th dose independent rect. 7 22
714 29.09 radiation 10.0 90 < th dose dependent rect. 18 10
739 29.12 humidity 70.0 10 > th dose independent rect. 18 11
755 29.13 humidity 90.0 90 > th dose dependent rect. 4 14
769 29.14 temperature 10.0 90 > th dose independent rect. 18 10
774 29.14 temperature 10.0 90 > th dose independent rect. 4 14
775 29.14 atmosphere 1015.0 90 < th dose independent rect. 4 14
776 29.14 precipitation 0.1 270 < th dose independent rect. 18 16
781 29.14 precipitation 0.1 270 < th dose dependent rect. 18 16
791 29.16 atmosphere 995.0 90 > th dose independent rect. 18 10
796 29.17 wind 7.0 10 < th dose independent rect. 5 2
798 29.17 temperature 10.0 10 > th dose independent rect. 5 2
800 29.17 temperature 30.0 10 < th dose independent rect. 5 2
801 29.17 humidity 50.0 10 > th dose independent rect. 5 2
804 29.17 atmosphere 995.0 10 > th dose independent rect. 5 2
809 29.17 precipitation 0.1 10 < th dose independent rect. 5 2
817 29.17 humidity 50.0 270 > th dose independent rect. 6 19
818 29.17 temperature 10.0 10 > th dose independent rect. 7 22
824 29.17 precipitation 0.1 10 < th dose dependent rect. 5 2
856 29.19 wind 9.0 10 < th dose dependent rect. 8 4
872 29.20 humidity 50.0 270 > th dose dependent rect. 21 9
923 29.23 wind 9.0 10 < th dose dependent rect. 5 2
926 29.23 humidity 80.0 90 > th dose dependent rect. 4 10
931 29.24 temperature 10.0 270 > th dose independent rect. 10 8
932 29.24 atmosphere 1015.0 270 < th dose independent rect. 10 8
935 29.24 temperature 10.0 270 > th dose independent rect. 18 16
979 29.26 temperature 30.0 270 < th dose independent rect. 21 9
980 29.26 humidity 50.0 270 > th dose independent rect. 21 9
983 29.26 atmosphere 995.0 270 > th dose independent rect. 21 9
984 29.26 radiation 20.0 270 < th dose independent rect. 21 9
989 29.26 temperature 10.0 270 > th dose independent rect. 6 15
990 29.26 humidity 50.0 270 > th dose independent rect. 18 16
993 29.26 atmosphere 1015.0 270 < th dose independent rect. 6 19