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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0411900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.19 (0.0213) R2 : 0.0107
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0995 (0.0448) R2dN8 : 0.0138 R2N8 : 0.0107
σ : 0.4
deviance : 73.61
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
65.75 0.381 3.21 -0.163 0.0993 -0.467 -0.0314 2.18 0.071 8.1 1.044 16 -- --
69.54 0.391 3.19 -0.0651 0.116 -0.254 -0.357 -- 0.094 5.93 1.085 13 -- --
65.75 0.378 3.21 -0.164 0.0987 -0.469 -- 2.18 0.071 8.25 1.042 16 -- --
69.66 0.391 3.19 -0.0673 0.125 -0.262 -- -- 0.0963 7.67 1.042 16 -- --
66.27 0.379 3.21 -0.169 -- -0.498 -- 2.23 0.0718 -- 1.028 16 -- --
71.61 0.397 3.19 -0.0373 0.184 -- -0.318 -- 0.0902 5.8 -- -- -- --
71.82 0.397 3.19 -0.0387 0.184 -- -- -- 0.0918 6.34 -- -- -- --
70.45 0.391 3.19 -0.076 -- -0.343 -- -- 0.0966 -- 1.072 13 -- --
69.78 0.391 3.19 -- 0.125 -0.256 -- -- 0.104 7.66 1.1 15 -- --
73.58 0.401 3.19 -0.0339 -- -- -- -- 0.0958 -- -- -- -- --
71.86 0.397 3.19 -- 0.184 -- -- -- 0.0961 6.35 -- -- -- --
70.6 0.393 3.19 -- -- -0.287 -- -- 0.106 -- 1.097 13 -- --
73.61 0.4 3.19 -- -- -- -- -- 0.0995 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 57.62 temperature 20.0 10 > th dose dependent rect. 2 1
3 57.66 wind 3.0 30 < th dose dependent rect. 2 1
4 57.67 wind 1.0 30 < th dose independent rect. 2 1
5 57.67 temperature 20.0 30 > th dose independent rect. 2 1
6 57.71 atmosphere 1005.0 30 > th dose independent rect. 2 1
9 57.73 radiation 10.0 43200 < th dose dependent rect. 3 1
11 57.74 radiation 1.0 4320 < th dose dependent rect. 3 1
14 57.76 humidity 90.0 30 > th dose independent rect. 2 1
24 57.80 atmosphere 995.0 30 > th dose dependent rect. 2 1
29 57.81 wind 9.0 1440 < th dose independent rect. 3 1
30 57.81 temperature 10.0 1440 > th dose independent rect. 3 1
33 57.81 temperature 30.0 1440 < th dose independent rect. 3 1
37 57.81 humidity 50.0 1440 > th dose independent rect. 3 1
46 57.81 atmosphere 995.0 1440 > th dose independent rect. 3 1
47 57.81 radiation 1.0 1440 < th dose independent rect. 3 1
67 57.81 temperature 10.0 1440 > th dose independent rect. 4 23
83 57.85 humidity 50.0 30 > th dose dependent rect. 2 1
87 57.86 temperature 10.0 30 > th dose independent rect. 2 1
89 57.86 temperature 30.0 30 < th dose independent rect. 2 1
90 57.86 humidity 50.0 30 > th dose independent rect. 2 1
94 57.86 atmosphere 1010.0 30 < th dose independent rect. 2 1
96 57.86 radiation 1.0 30 < th dose independent rect. 2 1
101 57.86 precipitation 0.1 30 < th dose independent rect. 2 1
102 57.86 temperature 10.0 30 > th dose independent rect. 3 23
104 57.86 radiation 1.0 30 < th dose dependent rect. 2 1
109 57.86 precipitation 0.1 30 < th dose dependent rect. 2 1
116 58.01 atmosphere 1000.0 30 > th dose independent rect. 3 23
117 58.01 atmosphere 1015.0 30 < th dose dependent rect. 2 1
126 58.23 temperature 30.0 30 < th dose dependent rect. 2 1
142 58.51 wind 1.0 30 > th dose independent rect. 2 1
172 58.89 precipitation 0.1 30 < th dose independent rect. 3 23
174 58.89 precipitation 0.1 30 < th dose dependent rect. 3 23
176 59.19 wind 9.0 30 < th dose independent rect. 3 23
196 60.98 wind 1.0 10 < th dose independent rect. 14 13
198 60.99 wind 1.0 10 < th dose independent rect. 17 10
201 60.99 wind 1.0 10 < th dose independent rect. 12 15
212 61.22 humidity 50.0 30 > th dose independent rect. 3 23
215 61.27 wind 1.0 30 < th dose dependent rect. 23 4
247 62.03 wind 1.0 30 < th dose dependent rect. 12 15
254 62.24 wind 1.0 10 < th dose independent rect. 6 21
276 63.20 atmosphere 1015.0 30 < th dose independent rect. 3 23
323 63.97 humidity 90.0 90 < th dose independent rect. 2 1
325 63.98 wind 1.0 10 > th dose independent sin 16 NA
351 64.34 wind 1.0 30 > th dose independent rect. 3 23
356 64.48 temperature 30.0 30 < th dose independent rect. 3 23
451 65.55 wind 1.0 10 < th dose independent sin 17 NA
468 65.62 temperature 25.0 270 > th dose independent rect. 23 4
587 66.60 wind 1.0 10 > th dose independent rect. 8 23
598 66.64 wind 1.0 10 > th dose independent no NA NA
608 66.68 wind 1.0 10 < th dose independent rect. 24 7
639 66.88 atmosphere 995.0 720 > th dose independent rect. 23 16
669 67.00 precipitation 0.1 720 < th dose independent rect. 15 8
672 67.00 precipitation 0.1 720 < th dose dependent rect. 15 8
720 67.10 wind 1.0 10 > th dose independent rect. 23 23
738 67.14 humidity 50.0 30 > th dose dependent rect. 3 23
749 67.22 precipitation 0.1 720 < th dose independent rect. 11 16
751 67.22 precipitation 0.1 720 < th dose dependent rect. 11 16
758 67.24 wind 1.0 10 > th dose independent rect. 14 23
777 67.29 humidity 50.0 720 > th dose independent rect. 3 8
779 67.30 temperature 10.0 720 > th dose independent rect. 15 8
782 67.30 temperature 10.0 720 > th dose independent rect. 23 16
792 67.33 wind 1.0 10 > th dose independent rect. 21 23
796 67.34 wind 9.0 720 < th dose independent rect. 3 8
806 67.34 wind 9.0 30 < th dose dependent rect. 3 23
815 67.38 temperature 10.0 720 > th dose independent rect. 3 8
816 67.38 atmosphere 995.0 720 > th dose independent rect. 3 8
818 67.38 temperature 10.0 720 > th dose independent rect. 11 16
825 67.40 radiation 10.0 30 < th dose dependent rect. 3 23
830 67.42 atmosphere 995.0 720 > th dose independent rect. 7 8
870 67.51 precipitation 0.1 720 < th dose independent rect. 19 8
871 67.51 wind 1.0 30 > th dose independent rect. 14 12
874 67.51 precipitation 0.1 720 < th dose dependent rect. 19 8
904 67.57 atmosphere 995.0 720 > th dose independent rect. 15 8
906 67.57 wind 1.0 10 > th dose independent rect. 18 13
908 67.57 atmosphere 995.0 720 > th dose independent rect. 11 16
912 67.58 precipitation 0.1 720 < th dose independent rect. 15 16
915 67.58 precipitation 0.1 720 < th dose dependent rect. 15 16
917 67.59 wind 9.0 720 < th dose independent rect. 19 8
948 67.66 wind 3.0 30 < th dose dependent rect. 1 7
957 67.68 wind 1.0 10 > th dose independent rect. 16 14
973 67.72 atmosphere 995.0 720 > th dose independent rect. 3 16
974 67.72 atmosphere 995.0 720 > th dose independent rect. 15 16
993 67.75 temperature 10.0 720 > th dose independent rect. 7 8
994 67.75 atmosphere 1015.0 720 < th dose independent rect. 7 8
995 67.75 temperature 10.0 720 > th dose independent rect. 15 16