Os03g0411000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Apoptosis inhibitory 5 family protein.
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Os03g0411000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Apoptosis inhibitory 5 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.13 | 0.309 | 9.07 | 1.94 | 0.129 | -0.919 | 0.208 | 3.76 | 0.469 | 19.3 | 21.78 | 1651 | -- | -- |
| 51.56 | 0.334 | 9.17 | 1.1 | 0.0588 | -0.967 | 0.309 | -- | 0.288 | 18.6 | 11.84 | 8585 | -- | -- |
| 43.19 | 0.306 | 9.07 | 1.96 | 0.156 | -0.939 | -- | 3.89 | 0.475 | 19.3 | 21.82 | 1737 | -- | -- |
| 51.57 | 0.334 | 9.17 | 1.1 | 0.085 | -0.974 | -- | -- | 0.293 | 21.5 | 10.97 | 8393 | -- | -- |
| 43.8 | 0.308 | 9.07 | 1.91 | -- | -0.89 | -- | 3.51 | 0.459 | -- | 21.82 | 1438 | -- | -- |
| 67.16 | 0.384 | 9.24 | 0.584 | 0.0788 | -- | 0.298 | -- | 0.00399 | 19 | -- | -- | -- | -- |
| 67.38 | 0.384 | 9.24 | 0.578 | 0.0796 | -- | -- | -- | 0.00451 | 19.5 | -- | -- | -- | -- |
| 51.97 | 0.336 | 9.17 | 1.1 | -- | -0.977 | -- | -- | 0.294 | -- | 9.658 | 8569 | -- | -- |
| 68.59 | 0.386 | 9.24 | -- | 0.171 | -0.484 | -- | -- | 0.0123 | 21.5 | 22.15 | 1052 | -- | -- |
| 67.72 | 0.385 | 9.24 | 0.577 | -- | -- | -- | -- | 0.00324 | -- | -- | -- | -- | -- |
| 76.19 | 0.408 | 9.25 | -- | 0.0751 | -- | -- | -- | -0.0599 | 20 | -- | -- | -- | -- |
| 69.21 | 0.387 | 9.25 | -- | -- | -0.406 | -- | -- | -0.0656 | -- | 26.5 | 1265 | -- | -- |
| 76.5 | 0.408 | 9.25 | -- | -- | -- | -- | -- | -0.0608 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.15 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 2 | 42.61 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 7 | 42.86 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 11 | 42.93 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 27 | 43.03 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 59 | 43.22 | temperature | 20 | 1440 | > th | dose dependent | sin | 18 | NA |
| 118 | 43.51 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 134 | 43.57 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 18 |
| 157 | 43.66 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 186 | 43.74 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 336 | 44.01 | humidity | 90 | 14400 | > th | dose dependent | rect. | 19 | 9 |
| 399 | 44.10 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 11 |
| 472 | 44.19 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 497 | 44.21 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 717 | 44.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 945 | 44.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 976 | 44.73 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |