Os03g0407900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Serine/threonine protein kinase-like.
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Os03g0407900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Serine/threonine protein kinase-like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 187.79 | 0.644 | 8.82 | 1.93 | 1.75 | 2.8 | -0.374 | 1.59 | 1.64 | 20.5 | 2.647 | 1435 | -- | -- |
| 189.31 | 0.641 | 8.79 | 2.11 | 1.74 | 2.63 | -0.346 | -- | 1.7 | 20.5 | 3.096 | 1436 | -- | -- |
| 188.15 | 0.639 | 8.82 | 1.94 | 1.78 | 2.8 | -- | 1.61 | 1.63 | 20.6 | 2.705 | 1430 | -- | -- |
| 189.71 | 0.641 | 8.79 | 2.13 | 1.74 | 2.62 | -- | -- | 1.7 | 20.5 | 3.123 | 1436 | -- | -- |
| 315.96 | 0.828 | 8.75 | 2.03 | -- | 3.48 | -- | 1.23 | 1.7 | -- | 2.825 | 1508 | -- | -- |
| 286.82 | 0.794 | 8.88 | 1.61 | 1.76 | -- | -0.576 | -- | 1.28 | 20.4 | -- | -- | -- | -- |
| 287.87 | 0.795 | 8.88 | 1.63 | 1.76 | -- | -- | -- | 1.28 | 20.4 | -- | -- | -- | -- |
| 317 | 0.829 | 8.73 | 2.15 | -- | 3.37 | -- | -- | 1.74 | -- | 3.063 | 1510 | -- | -- |
| 295.61 | 0.801 | 8.84 | -- | 1.63 | 2.03 | -- | -- | 1.43 | 19.9 | 5.377 | 1482 | -- | -- |
| 459.6 | 1 | 8.84 | 1.62 | -- | -- | -- | -- | 1.26 | -- | -- | -- | -- | -- |
| 358 | 0.885 | 8.92 | -- | 1.75 | -- | -- | -- | 1.09 | 20.5 | -- | -- | -- | -- |
| 424.32 | 0.959 | 8.79 | -- | -- | 2.51 | -- | -- | 1.45 | -- | 5.349 | 1526 | -- | -- |
| 528.94 | 1.07 | 8.88 | -- | -- | -- | -- | -- | 1.08 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 187.84 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 5 | 188.78 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 11 |
| 11 | 189.94 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 5 |
| 12 | 190.13 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 13 | 190.15 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 29 | 190.65 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 69 | 191.86 | temperature | 10 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 70 | 191.91 | temperature | 30 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 76 | 191.99 | radiation | 1 | 1440 | < th | dose independent | rect. | 10 | 21 |
| 81 | 192.16 | temperature | 10 | 14400 | > th | dose dependent | rect. | 15 | 14 |
| 87 | 192.20 | temperature | 10 | 14400 | > th | dose dependent | rect. | 17 | 11 |
| 101 | 192.27 | temperature | 10 | 14400 | > th | dose dependent | sin | 14 | NA |
| 114 | 192.33 | temperature | 30 | 14400 | < th | dose dependent | rect. | 17 | 12 |
| 125 | 192.36 | temperature | 30 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 231 | 192.72 | temperature | 30 | 14400 | < th | dose dependent | sin | 12 | NA |
| 299 | 192.89 | temperature | 25 | 14400 | < th | dose independent | sin | 15 | NA |
| 343 | 192.99 | temperature | 10 | 14400 | > th | dose dependent | rect. | 24 | 23 |
| 354 | 193.02 | temperature | 25 | 14400 | > th | dose independent | sin | 15 | NA |
| 359 | 193.03 | temperature | 10 | 14400 | > th | dose dependent | no | NA | NA |
| 391 | 193.09 | temperature | 10 | 14400 | > th | dose dependent | rect. | 21 | 23 |
| 426 | 193.14 | temperature | 10 | 14400 | > th | dose dependent | rect. | 3 | 23 |
| 546 | 193.35 | temperature | 10 | 14400 | > th | dose dependent | rect. | 24 | 10 |
| 550 | 193.36 | temperature | 10 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 584 | 193.41 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 16 |
| 587 | 193.41 | temperature | 30 | 14400 | < th | dose dependent | rect. | 24 | 10 |
| 590 | 193.42 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 599 | 193.43 | temperature | 30 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 629 | 193.47 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 630 | 193.47 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 19 |
| 644 | 193.49 | radiation | 1 | 1440 | > th | dose independent | rect. | 10 | 21 |
| 692 | 193.56 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 703 | 193.57 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 9 |
| 722 | 193.59 | temperature | 25 | 14400 | < th | dose independent | rect. | 15 | 18 |
| 768 | 193.63 | radiation | 1 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 790 | 193.66 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 876 | 193.79 | temperature | 25 | 14400 | > th | dose independent | rect. | 14 | 19 |