Os03g0399600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0399600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.93 | 0.441 | 7.21 | 0.142 | 1.45 | 0.765 | 0.5 | -0.695 | 0.275 | 3.55 | 4.359 | 10 | -- | -- |
| 88.77 | 0.439 | 7.21 | 0.122 | 1.46 | 0.799 | 0.795 | -- | 0.273 | 3.48 | 4.048 | 9 | -- | -- |
| 88.51 | 0.438 | 7.21 | 0.143 | 1.46 | 0.76 | -- | -0.965 | 0.273 | 3.55 | 3.99 | 9 | -- | -- |
| 90.74 | 0.444 | 7.21 | 0.107 | 1.46 | 0.785 | -- | -- | 0.269 | 3.53 | 4.476 | 9 | -- | -- |
| 177.39 | 0.624 | 7.21 | 0.197 | -- | -0.222 | -- | -1.26 | 0.299 | -- | 3.99 | 9 | -- | -- |
| 98.5 | 0.465 | 7.2 | 0.119 | 1.23 | -- | 0.762 | -- | 0.269 | 4.43 | -- | -- | -- | -- |
| 100.07 | 0.468 | 7.2 | 0.113 | 1.24 | -- | -- | -- | 0.265 | 4.47 | -- | -- | -- | -- |
| 123.82 | 0.518 | 7.19 | 0.197 | -- | -1.31 | -- | -- | 0.382 | -- | -85.09 | 520 | -- | -- |
| 91.04 | 0.444 | 7.21 | -- | 1.47 | 0.786 | -- | -- | 0.257 | 3.53 | 4.478 | 9 | -- | -- |
| 182.09 | 0.631 | 7.21 | 0.162 | -- | -- | -- | -- | 0.298 | -- | -- | -- | -- | -- |
| 100.4 | 0.469 | 7.21 | -- | 1.24 | -- | -- | -- | 0.252 | 4.47 | -- | -- | -- | -- |
| 124.89 | 0.52 | 7.2 | -- | -- | -1.3 | -- | -- | 0.376 | -- | -76.51 | 521 | -- | -- |
| 182.78 | 0.631 | 7.22 | -- | -- | -- | -- | -- | 0.28 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.43 | temperature | 20.0 | 720 | > th | dose independent | rect. | 5 | 2 |
| 3 | 79.22 | temperature | 20.0 | 720 | < th | dose independent | rect. | 4 | 3 |
| 4 | 79.26 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 5 | 3 |
| 42 | 82.91 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 7 |
| 57 | 83.38 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 88 | 84.57 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 4 | 3 |
| 99 | 84.81 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 106 | 84.99 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 107 | 85.05 | temperature | 20.0 | 720 | < th | dose independent | sin | 7 | NA |
| 122 | 85.24 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 134 | 85.37 | temperature | 25.0 | 270 | < th | dose independent | rect. | 9 | 2 |
| 151 | 85.55 | temperature | 20.0 | 720 | > th | dose dependent | sin | 6 | NA |
| 168 | 85.71 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 172 | 85.77 | temperature | 20.0 | 720 | > th | dose independent | rect. | 24 | 17 |
| 212 | 86.20 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 23 |
| 213 | 86.21 | temperature | 25.0 | 270 | < th | dose independent | rect. | 8 | 5 |
| 230 | 86.39 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 268 | 86.60 | radiation | 30.0 | 30 | < th | dose independent | rect. | 16 | 19 |
| 269 | 86.60 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 5 | 13 |
| 280 | 86.64 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 320 | 86.80 | temperature | 20.0 | 720 | > th | dose independent | sin | 7 | NA |
| 327 | 86.83 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 330 | 86.83 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 15 | 21 |
| 336 | 86.85 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 9 | 7 |
| 348 | 86.90 | radiation | 10.0 | 10 | < th | dose independent | rect. | 7 | 11 |
| 356 | 86.92 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 397 | 87.03 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 5 | 13 |
| 422 | 87.13 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 435 | 87.17 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 15 | 19 |
| 474 | 87.31 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 16 | 19 |
| 477 | 87.33 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 9 | 7 |
| 488 | 87.35 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 15 | 19 |
| 495 | 87.39 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 7 | 9 |
| 508 | 87.42 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 7 | 11 |
| 541 | 87.52 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 545 | 87.53 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 8 | 5 |
| 548 | 87.53 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 4 | 12 |
| 576 | 87.60 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 9 | 5 |
| 581 | 87.61 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 15 | 19 |
| 590 | 87.63 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 9 | 5 |
| 599 | 87.66 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 7 | 5 |
| 623 | 87.69 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 13 |
| 635 | 87.73 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 10 |
| 650 | 87.74 | radiation | 1.0 | 10 | > th | dose dependent | sin | 1 | NA |
| 662 | 87.76 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 3 |
| 670 | 87.78 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 706 | 87.87 | radiation | 20.0 | 1440 | < th | dose independent | sin | 12 | NA |
| 712 | 87.88 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 729 | 87.92 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 19 | 3 |
| 771 | 87.95 | radiation | 1.0 | 1440 | > th | dose dependent | sin | 11 | NA |
| 853 | 88.09 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 862 | 88.10 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 863 | 88.10 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 864 | 88.10 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 2 |
| 930 | 88.17 | radiation | 20.0 | 270 | < th | dose independent | rect. | 22 | 11 |
| 952 | 88.19 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 14 | 21 |