Os03g0398900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0398900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 251.11 | 0.745 | 5.96 | -0.277 | 0.933 | 1.19 | 0.573 | 3.24 | -1.66 | 8.54 | 74.36 | 6399 | -- | -- |
| 265.15 | 0.758 | 5.93 | -0.172 | 0.945 | 1.32 | 0.362 | -- | -1.66 | 8.31 | 70.02 | 7720 | -- | -- |
| 252.07 | 0.739 | 5.96 | -0.228 | 0.941 | 1.2 | -- | 3.2 | -1.68 | 8.48 | 75.74 | 6384 | -- | -- |
| 265.41 | 0.759 | 5.94 | -0.172 | 0.951 | 1.36 | -- | -- | -1.66 | 8.36 | 70.12 | 7729 | -- | -- |
| 294.61 | 0.799 | 6 | -0.229 | -- | 1.03 | -- | 3.53 | -1.7 | -- | 76.39 | 5885 | -- | -- |
| 292.16 | 0.801 | 5.95 | -0.325 | 0.843 | -- | 0.361 | -- | -1.66 | 8.54 | -- | -- | -- | -- |
| 292.57 | 0.801 | 5.95 | -0.314 | 0.843 | -- | -- | -- | -1.66 | 8.51 | -- | -- | -- | -- |
| 305.7 | 0.814 | 5.96 | -0.214 | -- | 1.35 | -- | -- | -1.62 | -- | 70.17 | 7174 | -- | -- |
| 266.12 | 0.76 | 5.94 | -- | 0.938 | 1.37 | -- | -- | -1.65 | 8.35 | 70.17 | 7749 | -- | -- |
| 332.35 | 0.852 | 5.97 | -0.31 | -- | -- | -- | -- | -1.65 | -- | -- | -- | -- | -- |
| 295.17 | 0.804 | 5.94 | -- | 0.842 | -- | -- | -- | -1.62 | 8.53 | -- | -- | -- | -- |
| 306.7 | 0.816 | 5.97 | -- | -- | 1.42 | -- | -- | -1.62 | -- | 71.1 | 7187 | -- | -- |
| 334.89 | 0.854 | 5.97 | -- | -- | -- | -- | -- | -1.61 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 241.98 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 2 | 243.19 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 3 | 243.28 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 4 | 243.62 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 5 | 243.63 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 6 | 243.63 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 7 | 243.71 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 12 | 244.05 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 16 | 244.42 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 22 | 244.51 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 6 |
| 23 | 244.53 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 24 | 6 |
| 34 | 245.04 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 35 | 245.05 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 42 | 245.13 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 43 | 245.15 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 46 | 245.26 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 50 | 245.35 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 53 | 245.45 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 55 | 245.68 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 57 | 245.68 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 10 |
| 61 | 245.76 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 3 |
| 67 | 245.87 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 73 | 245.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 83 | 246.06 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 88 | 246.18 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 90 | 246.18 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 97 | 246.23 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 100 | 246.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 120 | 246.57 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 131 | 246.77 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 138 | 246.82 | wind | 9.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 140 | 246.85 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 142 | 246.87 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 147 | 246.93 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 148 | 246.93 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 149 | 246.93 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 160 | 247.16 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 166 | 247.19 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 2 | NA |
| 167 | 247.19 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 2 | NA |
| 169 | 247.21 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 2 | NA |
| 218 | 247.93 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 271 | 248.44 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 282 | 248.51 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 320 | 248.82 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 354 | 249.06 | wind | 9.0 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 357 | 249.06 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 24 | 13 |
| 360 | 249.08 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 13 |
| 411 | 249.39 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 3 | NA |
| 437 | 249.51 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 569 | 250.32 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 609 | 250.58 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 6 |
| 624 | 250.68 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 625 | 250.68 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 633 | 250.74 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 650 | 250.81 | wind | 1.0 | 14400 | > th | dose dependent | sin | 7 | NA |
| 661 | 250.88 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 662 | 250.88 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 674 | 250.94 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 695 | 251.04 | wind | 9.0 | 14400 | < th | dose dependent | sin | 7 | NA |
| 700 | 251.06 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 744 | 251.21 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 776 | 251.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 795 | 251.47 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 798 | 251.47 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 808 | 251.50 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 835 | 251.62 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 836 | 251.63 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 854 | 251.69 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 855 | 251.69 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 13 |
| 856 | 251.70 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 871 | 251.77 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 15 |
| 892 | 251.90 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 966 | 252.21 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 969 | 252.22 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 8 | 5 |
| 996 | 252.29 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |