Os03g0398400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0398400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 179.2 | 0.629 | 3.98 | -0.183 | 0.464 | 0.72 | 0.182 | -0.725 | -0.874 | 8.46 | 30.44 | 1176 | -- | -- |
| 179.08 | 0.623 | 3.99 | -0.307 | 0.473 | 0.629 | 0.199 | -- | -0.869 | 8.45 | 30.8 | 1187 | -- | -- |
| 179.18 | 0.623 | 3.98 | -0.164 | 0.468 | 0.728 | -- | -0.812 | -0.873 | 8.46 | 30.6 | 1182 | -- | -- |
| 179.18 | 0.623 | 3.99 | -0.312 | 0.473 | 0.629 | -- | -- | -0.874 | 8.46 | 30.8 | 1187 | -- | -- |
| 189.24 | 0.641 | 4 | -0.194 | -- | 0.883 | -- | -0.661 | -0.873 | -- | 30.38 | 983 | -- | -- |
| 198.67 | 0.661 | 3.97 | -0.488 | 0.517 | -- | 0.285 | -- | -0.746 | 9.2 | -- | -- | -- | -- |
| 198.95 | 0.661 | 3.97 | -0.478 | 0.516 | -- | -- | -- | -0.746 | 9.16 | -- | -- | -- | -- |
| 189.32 | 0.641 | 4.01 | -0.3 | -- | 0.823 | -- | -- | -0.875 | -- | 30.3 | 983 | -- | -- |
| 181.67 | 0.628 | 3.98 | -- | 0.47 | 0.651 | -- | -- | -0.837 | 8.47 | 30.9 | 1190 | -- | -- |
| 214.37 | 0.684 | 3.98 | -0.48 | -- | -- | -- | -- | -0.744 | -- | -- | -- | -- | -- |
| 204.97 | 0.67 | 3.95 | -- | 0.516 | -- | -- | -- | -0.693 | 9.23 | -- | -- | -- | -- |
| 191.49 | 0.644 | 4 | -- | -- | 0.866 | -- | -- | -0.849 | -- | 30.3 | 985 | -- | -- |
| 220.43 | 0.693 | 3.97 | -- | -- | -- | -- | -- | -0.69 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 177.18 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 12 |
| 2 | 177.47 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 3 | 177.49 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 6 | 177.76 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 8 | 177.93 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 30 | 178.53 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 4 |
| 46 | 178.69 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 98 | 179.32 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 6 |
| 114 | 179.51 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 4 |
| 136 | 179.65 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 17 |
| 157 | 179.79 | temperature | 10 | 1440 | > th | dose dependent | sin | 20 | NA |
| 191 | 179.93 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 19 |
| 213 | 179.98 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 17 |
| 220 | 180.01 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 259 | 180.04 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 15 |
| 299 | 180.10 | temperature | 15 | 4320 | > th | dose dependent | sin | 16 | NA |
| 314 | 180.12 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 5 |
| 410 | 180.22 | temperature | 25 | 4320 | < th | dose dependent | rect. | 16 | 9 |
| 433 | 180.24 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 13 |
| 444 | 180.25 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 2 |
| 457 | 180.26 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 493 | 180.28 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 2 |
| 530 | 180.31 | temperature | 15 | 4320 | > th | dose dependent | rect. | 13 | 21 |
| 550 | 180.32 | temperature | 15 | 4320 | > th | dose dependent | rect. | 15 | 19 |
| 644 | 180.38 | temperature | 25 | 4320 | < th | dose dependent | sin | 17 | NA |
| 694 | 180.40 | temperature | 15 | 4320 | > th | dose dependent | rect. | 16 | 22 |
| 764 | 180.43 | temperature | 15 | 4320 | > th | dose dependent | rect. | 3 | 23 |
| 787 | 180.45 | temperature | 15 | 4320 | > th | dose dependent | no | NA | NA |
| 808 | 180.45 | temperature | 15 | 4320 | > th | dose dependent | rect. | 24 | 23 |
| 829 | 180.47 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 17 |
| 897 | 180.49 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 23 |
| 904 | 180.50 | temperature | 10 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 920 | 180.51 | humidity | 70 | 90 | > th | dose independent | rect. | 17 | 10 |
| 942 | 180.51 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 18 |