Os03g0397700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Serine/threonine protein kinase-like protein (Strubbelig receptor family 7).
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Os03g0397700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Serine/threonine protein kinase-like protein (Strubbelig receptor family 7).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 171.46 | 0.615 | 9.74 | -2.57 | 0.747 | 1.86 | 1.36 | -9.7 | 0.129 | 0.441 | 26.07 | 1263 | -- | -- |
| 189.13 | 0.641 | 9.53 | -0.683 | 0.844 | 1.48 | 1.19 | -- | 0.282 | 0.351 | 12.67 | 8445 | -- | -- |
| 177.58 | 0.621 | 9.73 | -2.93 | 0.778 | 2.19 | -- | -12.4 | 0.372 | 0.507 | 27.7 | 1287 | -- | -- |
| 194.59 | 0.65 | 9.54 | -0.737 | 0.836 | 1.5 | -- | -- | 0.268 | 0.325 | 11.45 | 8442 | -- | -- |
| 209.76 | 0.675 | 9.73 | -2.59 | -- | 2.17 | -- | -9.84 | 0.137 | -- | 26.21 | 1201 | -- | -- |
| 224.98 | 0.703 | 9.44 | 0.0998 | 0.904 | -- | 1.19 | -- | 0.716 | 0.474 | -- | -- | -- | -- |
| 231.1 | 0.712 | 9.44 | 0.0541 | 0.9 | -- | -- | -- | 0.71 | 0.459 | -- | -- | -- | -- |
| 237.24 | 0.717 | 9.53 | -0.781 | -- | 1.65 | -- | -- | 0.247 | -- | 10.71 | 8193 | -- | -- |
| 204.31 | 0.666 | 9.5 | -- | 0.846 | 1.06 | -- | -- | 0.46 | 0.47 | 13.68 | 7907 | -- | -- |
| 282.02 | 0.785 | 9.42 | 0.085 | -- | -- | -- | -- | 0.725 | -- | -- | -- | -- | -- |
| 231.18 | 0.711 | 9.44 | -- | 0.901 | -- | -- | -- | 0.704 | 0.462 | -- | -- | -- | -- |
| 231.23 | 0.708 | 9.47 | -- | -- | 1.62 | -- | -- | 0.499 | -- | 15.6 | 978 | -- | -- |
| 282.21 | 0.784 | 9.43 | -- | -- | -- | -- | -- | 0.716 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 158.60 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 2 | 160.62 | wind | 1 | 43200 | > th | dose dependent | rect. | 11 | 4 |
| 3 | 160.95 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 5 | 161.02 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 4 |
| 8 | 161.49 | wind | 3 | 43200 | > th | dose dependent | rect. | 10 | 7 |
| 15 | 161.96 | wind | 5 | 43200 | > th | dose independent | rect. | 12 | 4 |
| 19 | 162.13 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 21 | 162.18 | wind | 5 | 43200 | < th | dose independent | rect. | 12 | 4 |
| 24 | 162.23 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 6 |
| 27 | 162.30 | wind | 9 | 43200 | < th | dose dependent | rect. | 12 | 2 |
| 34 | 162.55 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 49 | 163.10 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 70 | 163.78 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 77 | 164.03 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 90 | 164.41 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 98 | 164.66 | wind | 3 | 43200 | > th | dose dependent | rect. | 10 | 11 |
| 102 | 164.71 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 10 |
| 130 | 165.13 | humidity | 80 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 132 | 165.15 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 140 | 165.20 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 151 | 165.40 | radiation | 40 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 166 | 165.57 | wind | 3 | 43200 | > th | dose dependent | sin | 21 | NA |
| 189 | 165.77 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 193 | 165.82 | wind | 5 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 226 | 166.18 | radiation | 20 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 227 | 166.20 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 229 | 166.22 | wind | 5 | 43200 | < th | dose independent | sin | 20 | NA |
| 237 | 166.29 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 238 | 166.30 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 241 | 166.32 | radiation | 40 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 263 | 166.35 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 266 | 166.37 | radiation | 20 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 309 | 166.61 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 13 |
| 320 | 166.73 | wind | 5 | 43200 | > th | dose independent | sin | 20 | NA |
| 334 | 166.84 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 436 | 167.48 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 449 | 167.54 | wind | 9 | 43200 | < th | dose dependent | sin | 22 | NA |
| 460 | 167.61 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 523 | 167.87 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 588 | 168.01 | radiation | 40 | 43200 | > th | dose independent | sin | 9 | NA |
| 598 | 168.06 | radiation | 20 | 43200 | < th | dose independent | rect. | 18 | 16 |
| 605 | 168.07 | radiation | 20 | 43200 | < th | dose independent | rect. | 21 | 13 |
| 728 | 168.57 | radiation | 30 | 43200 | < th | dose independent | rect. | 18 | 18 |
| 834 | 168.79 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 923 | 168.95 | wind | 1 | 43200 | > th | dose dependent | rect. | 19 | 2 |