Os03g0395900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0395900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.57 | 0.331 | 10.5 | -1.12 | 0.324 | -0.748 | 0.27 | 0.105 | 0.355 | 8.13 | 23.92 | 59 | -- | -- |
| 49.53 | 0.328 | 10.5 | -1.09 | 0.325 | -0.791 | 0.291 | -- | 0.366 | 8.09 | 23.36 | 61 | -- | -- |
| 49.73 | 0.328 | 10.5 | -1.08 | 0.32 | -0.774 | -- | -0.0379 | 0.37 | 8.26 | 23.33 | 61 | -- | -- |
| 49.72 | 0.328 | 10.5 | -1.09 | 0.322 | -0.787 | -- | -- | 0.368 | 8.27 | 23.32 | 61 | -- | -- |
| 55.18 | 0.348 | 10.5 | -1.09 | -- | -0.854 | -- | -0.0864 | 0.364 | -- | 23.33 | 61 | -- | -- |
| 57.41 | 0.355 | 10.5 | -0.927 | 0.371 | -- | 0.145 | -- | 0.477 | 9.34 | -- | -- | -- | -- |
| 57.49 | 0.355 | 10.5 | -0.921 | 0.37 | -- | -- | -- | 0.477 | 9.41 | -- | -- | -- | -- |
| 55.17 | 0.346 | 10.5 | -1.09 | -- | -0.851 | -- | -- | 0.357 | -- | 23.2 | 16 | -- | -- |
| 78.21 | 0.414 | 10.5 | -- | 0.339 | -0.353 | -- | -- | 0.543 | 9.18 | 22.88 | 41 | -- | -- |
| 65.51 | 0.378 | 10.5 | -0.923 | -- | -- | -- | -- | 0.479 | -- | -- | -- | -- | -- |
| 79.85 | 0.418 | 10.5 | -- | 0.371 | -- | -- | -- | 0.58 | 9.6 | -- | -- | -- | -- |
| 84.57 | 0.428 | 10.5 | -- | -- | -0.481 | -- | -- | 0.53 | -- | 23.05 | 10 | -- | -- |
| 88 | 0.438 | 10.5 | -- | -- | -- | -- | -- | 0.581 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.06 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 3 | 47.29 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 4 | 47.29 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 11 |
| 5 | 47.30 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 7 | 47.34 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 9 |
| 11 | 47.37 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 12 | 47.37 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 9 |
| 29 | 47.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 34 | 47.86 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 35 | 47.91 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 7 |
| 36 | 47.96 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 39 | 48.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 7 |
| 41 | 48.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 7 |
| 47 | 48.14 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 49 | 48.14 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 50 | 48.14 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 56 | 48.22 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 21 | 8 |
| 57 | 48.23 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 61 | 48.28 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 63 | 48.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 65 | 48.29 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 75 | 48.36 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 77 | 48.39 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 21 | 8 |
| 80 | 48.40 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 82 | 48.40 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 85 | 48.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 105 | 48.55 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 140 | 48.70 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 161 | 48.83 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 163 | 48.83 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 206 | 49.01 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 207 | 49.02 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 7 |
| 212 | 49.05 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 217 | 49.08 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 219 | 49.08 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 260 | 49.20 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 8 |
| 275 | 49.23 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 283 | 49.25 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 294 | 49.27 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 365 | 49.42 | humidity | 70.0 | 720 | > th | dose independent | rect. | 22 | 19 |
| 372 | 49.43 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 383 | 49.45 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 401 | 49.47 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 427 | 49.51 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 440 | 49.53 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 2 | NA |
| 441 | 49.53 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 2 | NA |
| 447 | 49.53 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 2 | NA |
| 465 | 49.55 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 484 | 49.58 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 491 | 49.59 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 492 | 49.59 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 494 | 49.59 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 519 | 49.62 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 529 | 49.63 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 540 | 49.64 | temperature | 20.0 | 30 | > th | dose independent | rect. | 9 | 16 |
| 549 | 49.64 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 554 | 49.66 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 559 | 49.66 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 569 | 49.67 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 570 | 49.67 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 571 | 49.67 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 584 | 49.70 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 593 | 49.70 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 9 | 22 |
| 596 | 49.71 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 5 |
| 641 | 49.76 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 653 | 49.77 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 654 | 49.77 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 663 | 49.78 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 695 | 49.81 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 703 | 49.82 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 710 | 49.82 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 717 | 49.83 | temperature | 20.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 731 | 49.84 | temperature | 25.0 | 90 | < th | dose dependent | no | NA | NA |
| 737 | 49.84 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 738 | 49.84 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 749 | 49.85 | wind | 5.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 751 | 49.85 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 773 | 49.86 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 795 | 49.88 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 823 | 49.90 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 859 | 49.92 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 10 |
| 867 | 49.92 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 6 |
| 877 | 49.93 | humidity | 70.0 | 720 | < th | dose independent | rect. | 9 | 8 |
| 887 | 49.94 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 888 | 49.94 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 902 | 49.95 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 906 | 49.95 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 918 | 49.96 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 928 | 49.96 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 12 |
| 953 | 49.98 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 954 | 49.98 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 10 |
| 961 | 49.99 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |