Os03g0395100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0395100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.19 | 0.298 | 6.62 | 0.881 | 0.408 | -0.487 | -0.622 | 2.66 | 0.131 | 0.986 | 20.28 | 2344 | -- | -- |
| 42.98 | 0.305 | 6.67 | 0.462 | 0.434 | -0.609 | -0.426 | -- | 0.102 | 1.21 | 11.89 | 15381 | -- | -- |
| 41.36 | 0.3 | 6.62 | 0.788 | 0.371 | -0.477 | -- | 2.38 | 0.118 | 0.879 | 19.13 | 1781 | -- | -- |
| 43.47 | 0.307 | 6.67 | 0.487 | 0.382 | -0.66 | -- | -- | 0.11 | 1.09 | 0.3438 | 15255 | -- | -- |
| 46.05 | 0.318 | 6.66 | 0.439 | -- | -0.695 | -- | 1.82 | 0.0347 | -- | 18.8 | 1709 | -- | -- |
| 49.04 | 0.328 | 6.73 | -0.0198 | 0.36 | -- | -0.462 | -- | -0.162 | 1.29 | -- | -- | -- | -- |
| 49.91 | 0.331 | 6.73 | -0.00358 | 0.36 | -- | -- | -- | -0.159 | 1.17 | -- | -- | -- | -- |
| 49.59 | 0.329 | 6.7 | 0.149 | -- | -0.761 | -- | -- | -0.0503 | -- | 0.3438 | 15255 | -- | -- |
| 45.64 | 0.315 | 6.7 | -- | 0.385 | -0.411 | -- | -- | -0.0555 | 1.22 | 8.456 | 9803 | -- | -- |
| 57.93 | 0.356 | 6.72 | 0.0102 | -- | -- | -- | -- | -0.152 | -- | -- | -- | -- | -- |
| 49.91 | 0.33 | 6.73 | -- | 0.36 | -- | -- | -- | -0.158 | 1.17 | -- | -- | -- | -- |
| 50.13 | 0.331 | 6.7 | -- | -- | -0.714 | -- | -- | -0.072 | -- | 8.456 | 9803 | -- | -- |
| 57.94 | 0.355 | 6.72 | -- | -- | -- | -- | -- | -0.153 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.31 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 2 | 39.32 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 5 | 39.43 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 6 |
| 19 | 39.49 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 30 | 39.51 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 62 | 39.54 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 75 | 39.56 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 89 | 39.56 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 105 | 39.59 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 120 | 39.60 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 143 | 39.61 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 155 | 39.63 | atmosphere | 1010 | 43200 | < th | dose independent | sin | 7 | NA |
| 158 | 39.63 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 196 | 39.65 | atmosphere | 1010 | 43200 | > th | dose independent | sin | 7 | NA |
| 237 | 39.66 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 269 | 39.68 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 328 | 39.69 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 363 | 39.70 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 461 | 39.72 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 3 | 20 |
| 501 | 39.73 | atmosphere | 1010 | 43200 | < th | dose independent | no | NA | NA |
| 622 | 39.74 | atmosphere | 1010 | 43200 | > th | dose independent | no | NA | NA |
| 757 | 39.76 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 810 | 39.76 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 11 |
| 901 | 39.78 | atmosphere | 1005 | 43200 | > th | dose dependent | sin | 7 | NA |
| 915 | 39.79 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 18 | 1 |