Os03g0388100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os03g0388100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 110.92 | 0.495 | 12 | -1.42 | 2.27 | 1.31 | 0.437 | -6.55e-05 | -0.988 | 8.54 | 19.2 | 1866 | -- | -- |
| 110.9 | 0.49 | 12 | -1.42 | 2.27 | 1.32 | 0.436 | -- | -0.989 | 8.54 | 19.2 | 1849 | -- | -- |
| 111.36 | 0.491 | 12 | -1.42 | 2.29 | 1.38 | -- | 0.0801 | -0.989 | 8.55 | 19.13 | 1744 | -- | -- |
| 111.37 | 0.492 | 12 | -1.41 | 2.29 | 1.37 | -- | -- | -0.991 | 8.55 | 19.15 | 1746 | -- | -- |
| 374.41 | 0.901 | 12 | -1.49 | -- | 1.48 | -- | 0.782 | -0.758 | -- | 21.2 | 667 | -- | -- |
| 135.7 | 0.546 | 12.1 | -1.92 | 2.29 | -- | 0.549 | -- | -1.21 | 8.55 | -- | -- | -- | -- |
| 136.67 | 0.547 | 12.1 | -1.9 | 2.29 | -- | -- | -- | -1.21 | 8.55 | -- | -- | -- | -- |
| 303.97 | 0.812 | 12.1 | -1.42 | -- | 1.57 | -- | -- | -0.665 | -- | 25.3 | 623 | -- | -- |
| 139.73 | 0.551 | 12 | -- | 2.27 | 1.82 | -- | -- | -0.752 | 8.54 | 19.2 | 7660 | -- | -- |
| 431.81 | 0.971 | 12.1 | -1.89 | -- | -- | -- | -- | -1.19 | -- | -- | -- | -- | -- |
| 232.11 | 0.713 | 12 | -- | 2.29 | -- | -- | -- | -0.998 | 8.61 | -- | -- | -- | -- |
| 350.04 | 0.871 | 11.9 | -- | -- | 1.86 | -- | -- | -0.353 | -- | 25.28 | 641 | -- | -- |
| 526.45 | 1.07 | 12.1 | -- | -- | -- | -- | -- | -0.979 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 103.71 | humidity | 80 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 2 | 104.98 | humidity | 80 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 3 | 105.53 | wind | 3 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 4 | 106.71 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 9 | 107.83 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 4 |
| 13 | 108.03 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 9 |
| 18 | 108.47 | wind | 1 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 21 | 108.58 | wind | 1 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 22 | 108.64 | wind | 9 | 14400 | < th | dose dependent | rect. | 22 | 3 |
| 31 | 108.79 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 21 |
| 36 | 108.94 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 12 |
| 38 | 108.95 | wind | 1 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 49 | 109.18 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 53 | 109.27 | wind | 1 | 43200 | > th | dose independent | rect. | 3 | 10 |
| 55 | 109.31 | wind | 3 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 59 | 109.40 | temperature | 20 | 270 | > th | dose independent | rect. | 13 | 16 |
| 69 | 109.53 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 7 |
| 86 | 109.72 | wind | 1 | 43200 | > th | dose independent | rect. | 1 | 13 |
| 103 | 109.89 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 113 | 109.99 | humidity | 80 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 141 | 110.23 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 17 |
| 148 | 110.31 | wind | 1 | 43200 | < th | dose independent | rect. | 3 | 10 |
| 155 | 110.34 | radiation | 10 | 30 | < th | dose dependent | sin | 1 | NA |
| 161 | 110.37 | wind | 1 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 178 | 110.49 | wind | 3 | 43200 | < th | dose dependent | rect. | 18 | 14 |
| 195 | 110.56 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 6 |
| 199 | 110.59 | wind | 1 | 43200 | > th | dose independent | sin | 6 | NA |
| 213 | 110.67 | radiation | 20 | 90 | < th | dose dependent | rect. | 24 | 19 |
| 283 | 111.10 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 306 | 111.24 | wind | 3 | 43200 | < th | dose dependent | sin | 10 | NA |
| 328 | 111.33 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 335 | 111.38 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 14 |
| 431 | 111.85 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 438 | 111.89 | wind | 1 | 43200 | < th | dose independent | sin | 6 | NA |
| 456 | 111.96 | temperature | 20 | 270 | > th | dose independent | rect. | 11 | 21 |
| 461 | 111.98 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 476 | 112.03 | wind | 3 | 43200 | < th | dose dependent | rect. | 22 | 15 |
| 484 | 112.06 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 3 |
| 508 | 112.14 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 517 | 112.17 | temperature | 20 | 10 | > th | dose independent | rect. | 1 | 20 |
| 524 | 112.21 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 549 | 112.27 | radiation | 10 | 90 | < th | dose independent | rect. | 24 | 19 |
| 553 | 112.29 | wind | 1 | 14400 | < th | dose independent | sin | 11 | NA |
| 554 | 112.29 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 584 | 112.37 | radiation | 20 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 601 | 112.41 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 610 | 112.42 | radiation | 20 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 618 | 112.44 | wind | 1 | 43200 | < th | dose dependent | rect. | 3 | 18 |
| 631 | 112.47 | radiation | 20 | 30 | < th | dose dependent | no | NA | NA |
| 633 | 112.48 | radiation | 20 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 655 | 112.54 | radiation | 20 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 662 | 112.56 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 673 | 112.58 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 16 |
| 674 | 112.58 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 18 |
| 682 | 112.60 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 686 | 112.61 | temperature | 20 | 10 | > th | dose independent | rect. | 15 | 15 |
| 722 | 112.72 | radiation | 20 | 30 | < th | dose dependent | rect. | 12 | 20 |
| 732 | 112.74 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 18 |
| 756 | 112.79 | wind | 1 | 43200 | > th | dose independent | rect. | 1 | 21 |
| 761 | 112.80 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 827 | 112.93 | radiation | 20 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 863 | 113.00 | temperature | 20 | 1440 | < th | dose dependent | rect. | 2 | 8 |
| 881 | 113.03 | temperature | 25 | 270 | < th | dose dependent | sin | 18 | NA |
| 905 | 113.07 | wind | 3 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 929 | 113.09 | wind | 1 | 43200 | > th | dose independent | rect. | 16 | 21 |
| 952 | 113.13 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 6 |
| 967 | 113.16 | temperature | 20 | 90 | > th | dose independent | rect. | 24 | 23 |
| 971 | 113.16 | humidity | 70 | 10 | > th | dose dependent | rect. | 1 | 18 |