Os03g0385400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant lipid transfer protein/Par allergen family protein.
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Os03g0385400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant lipid transfer protein/Par allergen family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.16 | 0.355 | 12.8 | -0.897 | 1.34 | 0.587 | 1.34 | 0.366 | -0.496 | 20.7 | 90 | 225 | -- | -- |
| 57.68 | 0.354 | 12.8 | -0.927 | 1.35 | 0.582 | 1.34 | -- | -0.498 | 20.6 | 89.99 | 216 | -- | -- |
| 62.84 | 0.369 | 12.8 | -0.943 | 1.36 | 0.535 | -- | 0.381 | -0.485 | 20.5 | 89.35 | 233 | -- | -- |
| 63.43 | 0.371 | 12.8 | -0.975 | 1.36 | 0.539 | -- | -- | -0.489 | 20.5 | 89.53 | 220 | -- | -- |
| 120.71 | 0.512 | 12.8 | -1.12 | -- | 1.33 | -- | 0.666 | -0.439 | -- | 81.99 | 628 | -- | -- |
| 71.49 | 0.396 | 12.8 | -1.03 | 1.59 | -- | 1.22 | -- | -0.397 | 19.7 | -- | -- | -- | -- |
| 75.69 | 0.407 | 12.8 | -1.06 | 1.59 | -- | -- | -- | -0.394 | 19.7 | -- | -- | -- | -- |
| 120.46 | 0.511 | 12.8 | -1.13 | -- | 1.39 | -- | -- | -0.448 | -- | 79.87 | 633 | -- | -- |
| 87.69 | 0.436 | 12.8 | -- | 1.3 | 0.652 | -- | -- | -0.399 | 20.6 | 89.53 | 255 | -- | -- |
| 212.42 | 0.681 | 12.8 | -1.08 | -- | -- | -- | -- | -0.418 | -- | -- | -- | -- | -- |
| 105.26 | 0.48 | 12.8 | -- | 1.6 | -- | -- | -- | -0.277 | 19.6 | -- | -- | -- | -- |
| 144.29 | 0.559 | 12.8 | -- | -- | 1.44 | -- | -- | -0.511 | -- | 88.55 | 511 | -- | -- |
| 243.22 | 0.728 | 12.7 | -- | -- | -- | -- | -- | -0.298 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.71 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 19 |
| 11 | 52.71 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 19 |
| 29 | 53.80 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 11 | 19 |
| 35 | 54.02 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 13 | 18 |
| 41 | 54.16 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 13 | 18 |
| 52 | 54.68 | humidity | 90.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 62 | 54.89 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 14 | 18 |
| 69 | 55.01 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 14 | 17 |
| 129 | 56.00 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 13 |
| 156 | 56.35 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 22 |
| 157 | 56.35 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 206 | 56.87 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 4 | 19 |
| 240 | 57.19 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 19 |
| 243 | 57.19 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 251 | 57.24 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 259 | 57.31 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 270 | 57.40 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 14 |
| 273 | 57.41 | temperature | 30.0 | 90 | < th | dose independent | rect. | 13 | 18 |
| 285 | 57.50 | humidity | 90.0 | 270 | < th | dose independent | rect. | 15 | 23 |
| 293 | 57.55 | humidity | 60.0 | 90 | > th | dose independent | rect. | 13 | 18 |
| 297 | 57.57 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 300 | 57.63 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 306 | 57.67 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 309 | 57.69 | humidity | 90.0 | 270 | < th | dose independent | rect. | 13 | 23 |
| 315 | 57.71 | temperature | 30.0 | 270 | < th | dose independent | rect. | 11 | 19 |
| 328 | 57.76 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 1 | 22 |
| 331 | 57.77 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 7 |
| 339 | 57.83 | temperature | 25.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 347 | 57.87 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 14 | 21 |
| 348 | 57.88 | humidity | 90.0 | 270 | < th | dose independent | rect. | 21 | 13 |
| 357 | 57.92 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 20 | 14 |
| 367 | 57.97 | wind | 1.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 372 | 57.99 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 4 | 14 |
| 384 | 58.04 | humidity | 90.0 | 270 | < th | dose independent | no | NA | NA |
| 392 | 58.08 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 3 |
| 405 | 58.13 | humidity | 90.0 | 270 | < th | dose independent | rect. | 20 | 23 |
| 417 | 58.18 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 5 |
| 418 | 58.18 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 421 | 58.19 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 4 | 15 |
| 424 | 58.20 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 433 | 58.23 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 434 | 58.24 | humidity | 90.0 | 270 | < th | dose independent | rect. | 18 | 16 |
| 444 | 58.25 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 451 | 58.27 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 459 | 58.29 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 7 | 6 |
| 463 | 58.30 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 464 | 58.30 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 466 | 58.30 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 467 | 58.30 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 469 | 58.30 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 471 | 58.30 | radiation | 30.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 474 | 58.30 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 489 | 58.33 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 493 | 58.34 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 495 | 58.34 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 496 | 58.34 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 500 | 58.34 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 501 | 58.34 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 507 | 58.34 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 511 | 58.35 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 513 | 58.35 | humidity | 90.0 | 270 | < th | dose independent | rect. | 17 | 18 |
| 527 | 58.38 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 541 | 58.40 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 548 | 58.41 | humidity | 90.0 | 270 | < th | dose independent | rect. | 18 | 23 |
| 574 | 58.46 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 576 | 58.46 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 582 | 58.47 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 4 |
| 583 | 58.47 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 587 | 58.47 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 613 | 58.49 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 15 |
| 625 | 58.51 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 630 | 58.51 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 632 | 58.52 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 643 | 58.55 | humidity | 70.0 | 90 | > th | dose dependent | sin | 7 | NA |
| 715 | 58.65 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 8 | 6 |
| 765 | 58.73 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 16 |
| 784 | 58.76 | temperature | 30.0 | 10 | < th | dose independent | rect. | 12 | 19 |
| 792 | 58.78 | wind | 3.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 807 | 58.82 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 816 | 58.84 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 830 | 58.88 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 11 |
| 832 | 58.88 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 11 |
| 848 | 58.91 | humidity | 80.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 854 | 58.92 | humidity | 80.0 | 90 | > th | dose dependent | no | NA | NA |
| 855 | 58.92 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 7 | 3 |
| 869 | 58.96 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 875 | 58.97 | radiation | 10.0 | 270 | < th | dose dependent | sin | 5 | NA |
| 904 | 59.04 | humidity | 50.0 | 90 | > th | dose independent | rect. | 7 | 6 |
| 905 | 59.04 | radiation | 30.0 | 270 | < th | dose dependent | sin | 10 | NA |
| 915 | 59.06 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 22 |
| 919 | 59.07 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 14 |
| 956 | 59.15 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 13 | 18 |
| 973 | 59.19 | radiation | 1.0 | 720 | > th | dose independent | rect. | 15 | 3 |
| 980 | 59.20 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 996 | 59.24 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 4 |