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Os03g0384900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12 (0.0171) R2 : 0.0113
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0822 (0.0361) R2dN8 : 0.0146 R2N8 : 0.0113
σ : 0.323
deviance : 47.74
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.82 0.252 12.1 -0.67 0.358 -0.421 -0.143 1.01 -0.0848 4.67 90.38 78 -- --
30.38 0.257 12.1 -0.615 0.384 -0.405 0.39 -- -0.0713 4.47 89.95 75 -- --
28.85 0.25 12.1 -0.665 0.362 -0.429 -- 0.938 -0.0844 4.67 90.46 77 -- --
30.74 0.258 12.1 -0.63 0.372 -0.367 -- -- -0.0696 4.6 89.79 76 -- --
33.71 0.27 12.1 -0.647 -- -0.189 -- 1.08 -0.0369 -- 90.48 75 -- --
34.05 0.274 12.1 -0.668 0.203 -- 0.0972 -- 0.00428 5.23 -- -- -- --
34.07 0.273 12.1 -0.667 0.204 -- -- -- 0.00386 5.3 -- -- -- --
34.91 0.275 12.1 -0.625 -- -0.264 -- -- -0.0374 -- 88 1134 -- --
40.9 0.298 12.1 -- 0.399 -0.433 -- -- -0.0116 4.45 89.2 49 -- --
36.24 0.281 12.1 -0.66 -- -- -- -- 0.00893 -- -- -- -- --
45.81 0.317 12 -- 0.192 -- -- -- 0.0782 5.43 -- -- -- --
44.96 0.312 12.1 -- -- -0.382 -- -- 0.011 -- 87.64 1151 -- --
47.74 0.323 12 -- -- -- -- -- 0.0822 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 27.18 wind 1.0 14400 > th dose independent rect. 18 4
2 27.39 wind 1.0 14400 > th dose independent rect. 20 2
4 27.52 radiation 30.0 43200 > th dose independent rect. 11 1
12 27.69 humidity 50.0 14400 < th dose independent rect. 16 20
13 27.72 humidity 50.0 14400 > th dose independent rect. 16 20
14 27.76 radiation 30.0 43200 < th dose dependent rect. 10 1
15 27.79 precipitation 0.1 14400 < th dose independent rect. 5 2
16 27.79 precipitation 0.1 14400 < th dose dependent rect. 5 2
17 27.82 humidity 60.0 14400 < th dose independent rect. 17 17
18 27.82 humidity 60.0 14400 < th dose dependent rect. 17 17
21 27.88 precipitation 0.1 14400 > th dose independent rect. 5 2
23 27.91 radiation 40.0 43200 < th dose independent rect. 10 1
27 27.92 precipitation 0.1 14400 > th dose dependent rect. 5 2
28 27.94 precipitation 0.1 14400 < th dose independent rect. 4 5
29 27.94 precipitation 0.1 14400 < th dose dependent rect. 4 5
30 27.95 humidity 70.0 14400 < th dose dependent rect. 9 1
31 27.97 precipitation 0.1 14400 > th dose independent rect. 4 5
32 27.98 precipitation 0.1 14400 < th dose independent rect. 4 8
33 27.98 precipitation 0.1 14400 < th dose dependent rect. 4 8
35 28.00 precipitation 0.1 14400 > th dose independent rect. 4 8
40 28.02 precipitation 0.1 43200 > th dose dependent rect. 20 1
41 28.02 humidity 60.0 14400 < th dose dependent rect. 16 19
43 28.03 humidity 60.0 14400 > th dose independent rect. 17 17
49 28.04 precipitation 0.1 14400 > th dose dependent rect. 4 8
53 28.05 precipitation 0.1 14400 > th dose dependent rect. 4 5
55 28.06 wind 1.0 14400 < th dose independent rect. 18 4
65 28.12 atmosphere 995.0 43200 < th dose independent rect. 15 8
67 28.12 precipitation 0.1 43200 > th dose dependent rect. 14 7
71 28.16 radiation 1.0 43200 > th dose dependent rect. 10 1
73 28.16 radiation 10.0 43200 < th dose dependent rect. 12 1
75 28.16 precipitation 0.1 43200 > th dose dependent rect. 17 5
81 28.18 precipitation 0.1 43200 > th dose dependent rect. 14 4
86 28.20 atmosphere 995.0 43200 > th dose independent rect. 15 8
87 28.21 humidity 50.0 14400 > th dose independent sin 11 NA
95 28.22 wind 7.0 43200 > th dose dependent rect. 11 2
97 28.23 humidity 50.0 14400 < th dose independent sin 10 NA
109 28.24 humidity 60.0 14400 < th dose dependent rect. 16 22
111 28.25 atmosphere 995.0 43200 < th dose independent rect. 16 6
112 28.25 humidity 60.0 14400 < th dose dependent rect. 13 1
113 28.25 radiation 30.0 43200 > th dose dependent rect. 10 1
117 28.27 atmosphere 995.0 43200 < th dose dependent rect. 16 6
127 28.29 humidity 70.0 14400 < th dose dependent rect. 8 3
130 28.30 wind 1.0 14400 < th dose independent rect. 20 1
137 28.31 atmosphere 995.0 43200 > th dose independent rect. 16 6
139 28.32 wind 9.0 43200 > th dose independent rect. 11 2
141 28.33 humidity 60.0 14400 > th dose independent sin 9 NA
143 28.33 humidity 70.0 14400 < th dose dependent sin 9 NA
148 28.34 humidity 60.0 14400 < th dose dependent sin 11 NA
152 28.35 precipitation 0.1 43200 < th dose independent rect. 15 3
153 28.35 precipitation 0.1 43200 < th dose dependent rect. 15 3
156 28.36 humidity 50.0 14400 > th dose independent sin 13 NA
166 28.38 precipitation 0.1 43200 < th dose independent rect. 17 4
168 28.38 wind 1.0 14400 < th dose dependent rect. 19 2
171 28.38 precipitation 0.1 43200 < th dose dependent rect. 17 4
190 28.40 precipitation 0.1 43200 > th dose independent rect. 17 4
203 28.42 humidity 50.0 14400 < th dose independent sin 13 NA
204 28.42 precipitation 0.1 43200 > th dose independent rect. 15 3
205 28.42 wind 9.0 43200 < th dose independent rect. 10 5
232 28.46 wind 9.0 43200 > th dose independent rect. 10 5
236 28.47 precipitation 0.1 43200 > th dose independent rect. 20 1
237 28.47 precipitation 0.1 43200 < th dose independent rect. 20 1
241 28.47 precipitation 0.1 43200 < th dose dependent rect. 20 1
279 28.51 precipitation 0.1 43200 > th dose dependent rect. 18 3
303 28.54 humidity 60.0 14400 > th dose independent rect. 8 4
310 28.55 humidity 50.0 4320 > th dose independent rect. 15 2
321 28.57 humidity 60.0 14400 > th dose independent rect. 9 1
326 28.58 wind 9.0 43200 < th dose independent rect. 11 2
331 28.58 humidity 60.0 14400 > th dose independent rect. 22 14
355 28.60 humidity 60.0 14400 < th dose independent rect. 8 5
431 28.66 humidity 60.0 14400 < th dose dependent rect. 12 22
469 28.71 humidity 60.0 14400 < th dose dependent rect. 11 9
474 28.71 humidity 60.0 14400 < th dose dependent rect. 8 12
496 28.72 humidity 60.0 14400 < th dose dependent no NA NA
569 28.73 humidity 60.0 14400 < th dose dependent sin 16 NA
591 28.74 humidity 90.0 90 > th dose dependent rect. 20 16
648 28.76 wind 9.0 43200 > th dose independent rect. 14 2
655 28.76 humidity 50.0 4320 > th dose independent rect. 14 9
675 28.76 humidity 50.0 14400 < th dose independent rect. 14 19
696 28.77 humidity 50.0 4320 > th dose independent rect. 14 4
725 28.77 wind 9.0 43200 > th dose dependent rect. 14 1
798 28.80 humidity 50.0 14400 < th dose independent rect. 14 4
822 28.80 precipitation 0.1 43200 > th dose dependent sin 17 NA
869 28.81 humidity 90.0 90 > th dose dependent rect. 23 23
936 28.85 humidity 90.0 90 > th dose dependent rect. 10 22
961 28.87 humidity 90.0 90 > th dose dependent sin 8 NA
982 28.88 humidity 90.0 90 > th dose dependent no NA NA