Os03g0383100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0383100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 386.4 | 0.924 | 3.29 | -0.364 | 0.563 | -0.437 | -0.84 | 0.892 | -0.289 | 8.89 | 1005 | 287 | -- | -- |
| 390.25 | 0.92 | 3.29 | -0.37 | 0.575 | -0.429 | -0.76 | -- | -0.304 | 8.84 | 1005 | 287 | -- | -- |
| 388.75 | 0.918 | 3.29 | -0.39 | 0.57 | -0.448 | -- | 0.844 | -0.286 | 8.74 | 1005 | 287 | -- | -- |
| 392.2 | 0.922 | 3.29 | -0.409 | 0.579 | -0.433 | -- | -- | -0.313 | 8.73 | 1005 | 287 | -- | -- |
| 406.46 | 0.939 | 3.31 | -0.381 | -- | -0.396 | -- | 0.865 | -0.309 | -- | 1005 | 279 | -- | -- |
| 402.71 | 0.941 | 3.33 | -0.376 | 0.512 | -- | -0.849 | -- | -0.471 | 9.09 | -- | -- | -- | -- |
| 405.22 | 0.943 | 3.33 | -0.407 | 0.517 | -- | -- | -- | -0.472 | 9 | -- | -- | -- | -- |
| 410.24 | 0.943 | 3.31 | -0.396 | -- | -0.382 | -- | -- | -0.333 | -- | 1005 | 282 | -- | -- |
| 396.55 | 0.927 | 3.28 | -- | 0.564 | -0.435 | -- | -- | -0.273 | 8.8 | 1005 | 282 | -- | -- |
| 420.55 | 0.958 | 3.34 | -0.407 | -- | -- | -- | -- | -0.468 | -- | -- | -- | -- | -- |
| 409.58 | 0.947 | 3.32 | -- | 0.516 | -- | -- | -- | -0.426 | 9.06 | -- | -- | -- | -- |
| 414.49 | 0.948 | 3.3 | -- | -- | -0.388 | -- | -- | -0.287 | -- | 1005 | 299 | -- | -- |
| 424.93 | 0.962 | 3.33 | -- | -- | -- | -- | -- | -0.423 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 376.41 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 3 | 17 |
| 2 | 376.50 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 3 | 7 |
| 12 | 377.41 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 4 | 16 |
| 13 | 377.51 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 5 | 6 |
| 18 | 377.75 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 21 | 377.79 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 18 |
| 22 | 377.85 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 4 | 4 |
| 41 | 378.61 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 5 | 6 |
| 44 | 378.70 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 17 |
| 47 | 378.77 | atmosphere | 995 | 720 | > th | dose dependent | rect. | 24 | 7 |
| 88 | 379.74 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 23 | 15 |
| 102 | 379.90 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 16 |
| 119 | 380.07 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 183 | 380.91 | wind | 3 | 90 | < th | dose dependent | sin | 23 | NA |
| 194 | 381.06 | temperature | 30 | 90 | > th | dose independent | rect. | 10 | 1 |
| 218 | 381.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 18 |
| 224 | 381.29 | atmosphere | 995 | 720 | > th | dose dependent | rect. | 24 | 12 |
| 226 | 381.32 | atmosphere | 1015 | 720 | < th | dose dependent | rect. | 23 | 9 |
| 239 | 381.43 | wind | 1 | 90 | < th | dose independent | rect. | 5 | 17 |
| 273 | 381.68 | wind | 1 | 90 | < th | dose independent | sin | 22 | NA |
| 276 | 381.68 | atmosphere | 1015 | 30 | < th | dose dependent | rect. | 7 | 16 |
| 297 | 381.86 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 305 | 381.93 | atmosphere | 1005 | 270 | > th | dose independent | sin | 2 | NA |
| 316 | 382.05 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 11 | 7 |
| 318 | 382.08 | atmosphere | 1005 | 270 | < th | dose independent | sin | 3 | NA |
| 330 | 382.13 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 8 | 8 |
| 338 | 382.16 | wind | 3 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 351 | 382.24 | wind | 1 | 90 | < th | dose independent | rect. | 7 | 15 |
| 352 | 382.24 | temperature | 30 | 90 | < th | dose dependent | rect. | 10 | 7 |
| 360 | 382.29 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 8 |
| 363 | 382.32 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 7 | 2 |
| 376 | 382.39 | atmosphere | 995 | 720 | > th | dose dependent | sin | 7 | NA |
| 388 | 382.42 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 19 |
| 392 | 382.45 | atmosphere | 1015 | 720 | < th | dose dependent | sin | 8 | NA |
| 409 | 382.50 | wind | 1 | 270 | < th | dose dependent | rect. | 5 | 17 |
| 440 | 382.62 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 20 |
| 501 | 382.86 | temperature | 30 | 90 | > th | dose dependent | rect. | 18 | 19 |
| 511 | 382.90 | atmosphere | 1000 | 10 | > th | dose dependent | rect. | 1 | 16 |
| 568 | 383.07 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 5 | 1 |
| 575 | 383.07 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 590 | 383.10 | temperature | 30 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 613 | 383.22 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 3 |
| 624 | 383.26 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 1 |
| 630 | 383.28 | atmosphere | 1015 | 720 | < th | dose dependent | rect. | 22 | 16 |
| 682 | 383.45 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 22 | 16 |
| 684 | 383.46 | temperature | 30 | 10 | > th | dose dependent | rect. | 10 | 2 |
| 751 | 383.65 | temperature | 30 | 270 | < th | dose independent | rect. | 22 | 15 |
| 799 | 383.76 | wind | 1 | 30 | > th | dose dependent | rect. | 11 | 19 |
| 810 | 383.80 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 858 | 383.94 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 3 | 11 |
| 864 | 383.95 | wind | 3 | 90 | < th | dose dependent | rect. | 7 | 14 |
| 890 | 384.02 | wind | 1 | 90 | > th | dose independent | sin | 22 | NA |
| 900 | 384.05 | atmosphere | 995 | 270 | > th | dose dependent | sin | 3 | NA |
| 909 | 384.07 | wind | 3 | 30 | > th | dose independent | rect. | 11 | 7 |
| 927 | 384.10 | atmosphere | 1015 | 270 | < th | dose dependent | sin | 3 | NA |
| 939 | 384.14 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 949 | 384.17 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 5 | 9 |
| 955 | 384.20 | temperature | 25 | 270 | < th | dose independent | rect. | 8 | 19 |
| 993 | 384.28 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 21 | 21 |