Os03g0381300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HSP20-like chaperone domain containing protein.
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Os03g0381300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HSP20-like chaperone domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.37 | 0.416 | 9.71 | -0.835 | 1.19 | 1.65 | 0.91 | 0.887 | -0.174 | 11.9 | 15.39 | 10 | -- | -- |
| 78.8 | 0.413 | 9.72 | -0.957 | 1.19 | 1.55 | 1.15 | -- | -0.205 | 11.9 | 16.8 | 10 | -- | -- |
| 80.95 | 0.419 | 9.69 | -0.664 | 1.16 | 1.71 | -- | 1.93 | -0.133 | 11.8 | 15.29 | 9 | -- | -- |
| 83.75 | 0.426 | 9.72 | -0.899 | 1.17 | 1.47 | -- | -- | -0.209 | 11.7 | 19.5 | 18 | -- | -- |
| 147.27 | 0.565 | 9.75 | -0.915 | -- | 2.5 | -- | 1.48 | -0.313 | -- | 17.6 | 5 | -- | -- |
| 106.76 | 0.484 | 9.67 | -0.642 | 1.61 | -- | 1.4 | -- | 0.0328 | 12.6 | -- | -- | -- | -- |
| 115.08 | 0.502 | 9.66 | -0.59 | 1.61 | -- | -- | -- | 0.0392 | 12.6 | -- | -- | -- | -- |
| 149.08 | 0.569 | 9.78 | -1.12 | -- | 2.4 | -- | -- | -0.374 | -- | 19.21 | 5 | -- | -- |
| 103.37 | 0.474 | 9.69 | -- | 1.26 | 1.12 | -- | -- | -0.0663 | 12 | 20.51 | 10 | -- | -- |
| 277.11 | 0.778 | 9.69 | -0.646 | -- | -- | -- | -- | 0.0118 | -- | -- | -- | -- | -- |
| 124.26 | 0.521 | 9.65 | -- | 1.62 | -- | -- | -- | 0.105 | 12.6 | -- | -- | -- | -- |
| 179.84 | 0.625 | 9.74 | -- | -- | 2.09 | -- | -- | -0.209 | -- | 20.6 | 3 | -- | -- |
| 288.14 | 0.792 | 9.68 | -- | -- | -- | -- | -- | 0.0835 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.76 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 14 | 69.29 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 18 |
| 35 | 71.52 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 39 | 71.86 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 16 |
| 41 | 72.10 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 52 | 72.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 4 |
| 55 | 72.88 | temperature | 15 | 30 | > th | dose dependent | sin | 4 | NA |
| 105 | 74.48 | temperature | 15 | 30 | > th | dose dependent | rect. | 6 | 12 |
| 156 | 75.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 219 | 76.87 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 1 |
| 233 | 77.19 | temperature | 30 | 30 | < th | dose dependent | sin | 4 | NA |
| 250 | 77.54 | temperature | 25 | 10 | > th | dose dependent | sin | 8 | NA |
| 251 | 77.56 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 286 | 78.16 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 300 | 78.32 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 12 |
| 306 | 78.34 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 5 |
| 312 | 78.41 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 313 | 78.41 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 358 | 79.00 | temperature | 30 | 30 | < th | dose independent | rect. | 11 | 19 |
| 362 | 79.05 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 4 |
| 369 | 79.14 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 385 | 79.34 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 12 |
| 404 | 79.49 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 408 | 79.54 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 421 | 79.64 | temperature | 25 | 30 | > th | dose independent | rect. | 6 | 5 |
| 427 | 79.66 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 447 | 79.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 448 | 79.80 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 456 | 79.87 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 19 |
| 458 | 79.88 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 12 |
| 460 | 79.91 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 21 |
| 468 | 79.98 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 522 | 80.31 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 548 | 80.52 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 550 | 80.55 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 12 |
| 630 | 81.14 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 4 |
| 637 | 81.20 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 645 | 81.23 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 23 |
| 648 | 81.28 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 20 |
| 651 | 81.30 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 653 | 81.31 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 672 | 81.41 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 20 |
| 688 | 81.52 | temperature | 25 | 90 | > th | dose independent | rect. | 2 | 9 |
| 729 | 81.66 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 10 |
| 746 | 81.71 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 751 | 81.73 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 804 | 81.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 810 | 82.03 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 830 | 82.09 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 17 |
| 891 | 82.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 953 | 82.46 | temperature | 20 | 720 | > th | dose independent | sin | 8 | NA |
| 999 | 82.65 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |