Os03g0381200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Capping protein beta 3 subunit (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os03g0381200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Capping protein beta 3 subunit (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.11 | 0.221 | 12.4 | -1.26 | 0.0107 | 0.799 | -0.43 | -3.38 | -0.0812 | 16.5 | 24.7 | 932 | -- | -- |
| 26.21 | 0.238 | 12.3 | -0.607 | 0.0299 | 0.519 | 0.295 | -- | 0.0842 | 4.12 | 24 | 867 | -- | -- |
| 22.59 | 0.221 | 12.4 | -1.27 | 0.00162 | 0.809 | -- | -3.48 | -0.0836 | 16.1 | 24.8 | 917 | -- | -- |
| 26.36 | 0.239 | 12.3 | -0.577 | 0.0677 | 0.464 | -- | -- | 0.0831 | 20.4 | 24.1 | 939 | -- | -- |
| 22.59 | 0.221 | 12.4 | -1.26 | -- | 0.807 | -- | -3.44 | -0.0789 | -- | 24.8 | 916 | -- | -- |
| 31.35 | 0.262 | 12.3 | -0.464 | 0.19 | -- | -0.332 | -- | 0.14 | 20.9 | -- | -- | -- | -- |
| 31.65 | 0.263 | 12.3 | -0.455 | 0.191 | -- | -- | -- | 0.139 | 21.6 | -- | -- | -- | -- |
| 26.52 | 0.24 | 12.3 | -0.585 | -- | 0.503 | -- | -- | 0.0792 | -- | 24.1 | 898 | -- | -- |
| 34.47 | 0.273 | 12.3 | -- | 0.11 | 0.308 | -- | -- | 0.171 | 20.7 | 24.89 | 957 | -- | -- |
| 33.8 | 0.272 | 12.3 | -0.453 | -- | -- | -- | -- | 0.139 | -- | -- | -- | -- | -- |
| 37.09 | 0.285 | 12.3 | -- | 0.19 | -- | -- | -- | 0.19 | 21.4 | -- | -- | -- | -- |
| 34.92 | 0.275 | 12.3 | -- | -- | 0.377 | -- | -- | 0.162 | -- | 24.51 | 868 | -- | -- |
| 39.21 | 0.292 | 12.3 | -- | -- | -- | -- | -- | 0.189 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.39 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 10 |
| 2 | 20.40 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 16 |
| 11 | 20.55 | temperature | 20 | 90 | > th | dose dependent | sin | 12 | NA |
| 16 | 20.61 | temperature | 25 | 720 | > th | dose dependent | sin | 13 | NA |
| 24 | 20.68 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 5 |
| 59 | 21.08 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 14 |
| 75 | 21.20 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 16 |
| 92 | 21.30 | temperature | 30 | 90 | < th | dose dependent | sin | 12 | NA |
| 95 | 21.35 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 5 |
| 102 | 21.37 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 108 | 21.40 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 9 |
| 125 | 21.46 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 3 |
| 157 | 21.57 | temperature | 25 | 720 | < th | dose independent | rect. | 16 | 6 |
| 158 | 21.57 | temperature | 25 | 720 | < th | dose independent | rect. | 15 | 8 |
| 282 | 21.98 | temperature | 25 | 720 | < th | dose independent | rect. | 19 | 1 |
| 333 | 22.12 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 6 |
| 354 | 22.18 | temperature | 25 | 720 | > th | dose independent | sin | 17 | NA |
| 363 | 22.21 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 393 | 22.26 | temperature | 25 | 720 | < th | dose independent | sin | 17 | NA |
| 674 | 22.87 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 752 | 23.00 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 13 |