Os03g0379100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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Os03g0379100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.99 | 0.188 | 9.96 | 1.01 | 0.591 | -0.58 | -0.0907 | 2.52 | -0.0352 | 11.5 | 25.02 | 3994 | -- | -- |
| 16.98 | 0.192 | 10 | 0.488 | 0.61 | -0.351 | -0.168 | -- | -0.0504 | 11.5 | 19.99 | 8319 | -- | -- |
| 16.02 | 0.186 | 9.96 | 1.01 | 0.591 | -0.582 | -- | 2.56 | -0.0342 | 11.5 | 25.02 | 3978 | -- | -- |
| 17.01 | 0.192 | 10 | 0.53 | 0.616 | -0.394 | -- | -- | -0.0381 | 11.4 | 18.31 | 8378 | -- | -- |
| 35.34 | 0.277 | 9.95 | 1.16 | -- | -0.747 | -- | 2.52 | 0.0747 | -- | 24.1 | 2411 | -- | -- |
| 20.79 | 0.214 | 10 | 0.314 | 0.637 | -- | -0.13 | -- | -0.177 | 11.5 | -- | -- | -- | -- |
| 20.87 | 0.214 | 10 | 0.309 | 0.638 | -- | -- | -- | -0.178 | 11.5 | -- | -- | -- | -- |
| 33.11 | 0.268 | 10 | 0.506 | -- | -0.728 | -- | -- | -0.0484 | -- | 19.35 | 898 | -- | -- |
| 21.93 | 0.218 | 10 | -- | 0.629 | -0.181 | -- | -- | -0.148 | 11.3 | 27.31 | 8396 | -- | -- |
| 46.39 | 0.318 | 10.1 | 0.291 | -- | -- | -- | -- | -0.185 | -- | -- | -- | -- | -- |
| 23.38 | 0.226 | 10 | -- | 0.634 | -- | -- | -- | -0.212 | 11.5 | -- | -- | -- | -- |
| 39.2 | 0.292 | 10 | -- | -- | -0.559 | -- | -- | -0.13 | -- | 21.2 | 894 | -- | -- |
| 48.63 | 0.326 | 10.1 | -- | -- | -- | -- | -- | -0.217 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.28 | temperature | 25 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 4 | 15.36 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 17 |
| 10 | 15.44 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 12 | 15.45 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 15 | 15.46 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 5 |
| 22 | 15.49 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 5 |
| 32 | 15.53 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 12 |
| 36 | 15.54 | temperature | 25 | 1440 | < th | dose independent | rect. | 18 | 8 |
| 39 | 15.55 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 42 | 15.55 | temperature | 20 | 720 | > th | dose dependent | sin | 12 | NA |
| 125 | 15.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 19 |
| 129 | 15.73 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 10 |
| 153 | 15.76 | temperature | 25 | 4320 | > th | dose dependent | sin | 14 | NA |
| 163 | 15.77 | temperature | 25 | 720 | > th | dose independent | rect. | 17 | 18 |
| 190 | 15.79 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 13 |
| 217 | 15.81 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 14 |
| 246 | 15.84 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 289 | 15.87 | temperature | 25 | 4320 | > th | dose independent | sin | 15 | NA |
| 290 | 15.87 | temperature | 25 | 4320 | < th | dose independent | sin | 15 | NA |
| 299 | 15.87 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 14 |
| 308 | 15.88 | temperature | 25 | 1440 | < th | dose independent | sin | 13 | NA |
| 345 | 15.90 | temperature | 25 | 1440 | < th | dose independent | rect. | 18 | 18 |
| 346 | 15.90 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 372 | 15.91 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 459 | 15.95 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 15 |
| 686 | 16.08 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 791 | 16.12 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 9 |
| 839 | 16.14 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 16 |