Os03g0377500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0377500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.7 | 0.219 | 8.92 | 0.355 | 0.45 | -0.711 | -0.253 | 1.81 | 0.309 | 1.54 | 23.94 | 1247 | -- | -- |
| 23.06 | 0.224 | 8.97 | -0.121 | 0.463 | -0.575 | -0.143 | -- | 0.203 | 1.45 | 22.84 | 1177 | -- | -- |
| 21.95 | 0.218 | 8.92 | 0.361 | 0.446 | -0.711 | -- | 1.77 | 0.31 | 1.57 | 23.9 | 1264 | -- | -- |
| 23.11 | 0.224 | 8.97 | -0.117 | 0.456 | -0.562 | -- | -- | 0.199 | 1.44 | 22.91 | 1181 | -- | -- |
| 27.62 | 0.246 | 8.95 | -0.000808 | -- | -0.785 | -- | 1.34 | 0.231 | -- | 23.9 | 1264 | -- | -- |
| 32.95 | 0.269 | 8.99 | -0.306 | 0.349 | -- | -0.232 | -- | 0.0892 | 1.58 | -- | -- | -- | -- |
| 33.17 | 0.27 | 8.99 | -0.298 | 0.349 | -- | -- | -- | 0.0905 | 1.57 | -- | -- | -- | -- |
| 26.49 | 0.241 | 8.96 | -0.14 | -- | -0.761 | -- | -- | 0.218 | -- | 21.41 | 1714 | -- | -- |
| 23.45 | 0.226 | 8.97 | -- | 0.458 | -0.587 | -- | -- | 0.216 | 1.42 | 22.91 | 1182 | -- | -- |
| 40.62 | 0.298 | 8.99 | -0.284 | -- | -- | -- | -- | 0.0981 | -- | -- | -- | -- | -- |
| 35.51 | 0.279 | 8.99 | -- | 0.344 | -- | -- | -- | 0.124 | 1.54 | -- | -- | -- | -- |
| 26.99 | 0.243 | 8.96 | -- | -- | -0.789 | -- | -- | 0.237 | -- | 21.41 | 1714 | -- | -- |
| 42.75 | 0.305 | 8.98 | -- | -- | -- | -- | -- | 0.13 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.72 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 2 | 21.73 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 3 | 21.74 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 6 | 21.76 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 24 | 21.85 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 14 |
| 45 | 21.90 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 48 | 21.92 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 149 | 22.21 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 13 |
| 189 | 22.25 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 19 |
| 247 | 22.29 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 340 | 22.76 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 346 | 22.80 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 19 |
| 351 | 22.83 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 22 |
| 419 | 23.08 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 420 | 23.08 | temperature | 20 | 30 | > th | dose dependent | rect. | 24 | 20 |
| 500 | 23.27 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 9 |
| 523 | 23.30 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 9 |
| 741 | 23.55 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 2 |
| 754 | 23.56 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 767 | 23.57 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 11 |
| 838 | 23.62 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 5 |
| 849 | 23.63 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 7 |
| 924 | 23.69 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 945 | 23.70 | wind | 7 | 43200 | < th | dose independent | rect. | 9 | 12 |
| 956 | 23.71 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 2 |
| 965 | 23.71 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 16 |
| 976 | 23.72 | temperature | 25 | 1440 | > th | dose independent | sin | 16 | NA |
| 994 | 23.73 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 4 |