Os03g0374600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 17 protein.
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Os03g0374600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 17 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.66 | 0.452 | 6.72 | -0.758 | 1.24 | 1.18 | -0.383 | -2.73 | -0.0863 | 20.8 | 18.7 | 283 | -- | -- |
| 98.36 | 0.462 | 6.66 | -0.27 | 1.26 | 1.26 | -0.532 | -- | 0.0578 | 20.7 | 12.95 | 272 | -- | -- |
| 92.98 | 0.449 | 6.72 | -0.775 | 1.22 | 1.18 | -- | -2.88 | -0.101 | 20.6 | 18.7 | 328 | -- | -- |
| 99.25 | 0.464 | 6.66 | -0.252 | 1.28 | 1.25 | -- | -- | 0.0586 | 20.7 | 12.99 | 251 | -- | -- |
| 151.91 | 0.574 | 6.72 | -1.06 | -- | 1.8 | -- | -3.79 | -0.212 | -- | 21.15 | 546 | -- | -- |
| 115.23 | 0.503 | 6.62 | 0.0072 | 1.48 | -- | -0.39 | -- | 0.238 | 19.9 | -- | -- | -- | -- |
| 115.67 | 0.504 | 6.62 | 0.0176 | 1.48 | -- | -- | -- | 0.237 | 19.9 | -- | -- | -- | -- |
| 162.38 | 0.593 | 6.66 | -0.48 | -- | 1.99 | -- | -- | -0.0965 | -- | 16.5 | 557 | -- | -- |
| 100.72 | 0.467 | 6.65 | -- | 1.29 | 1.09 | -- | -- | 0.101 | 20.6 | 15.3 | 251 | -- | -- |
| 235.03 | 0.716 | 6.58 | 0.000922 | -- | -- | -- | -- | 0.217 | -- | -- | -- | -- | -- |
| 115.68 | 0.503 | 6.62 | -- | 1.48 | -- | -- | -- | 0.235 | 19.9 | -- | -- | -- | -- |
| 167.73 | 0.603 | 6.64 | -- | -- | 1.66 | -- | -- | -0.0213 | -- | 18.7 | 547 | -- | -- |
| 235.03 | 0.716 | 6.58 | -- | -- | -- | -- | -- | 0.217 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.67 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 2 | 87.67 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 3 | 87.87 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 4 | 87.89 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 5 | 87.94 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 20 |
| 7 | 88.24 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 8 | 88.28 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 13 | 88.41 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 19 | 88.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 6 |
| 22 | 88.67 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 23 | 88.68 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 24 | 88.71 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 25 | 88.71 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 11 | 4 |
| 27 | 88.72 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 6 |
| 28 | 88.73 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 29 | 88.73 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 6 |
| 38 | 89.06 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 39 | 89.07 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 59 | 89.23 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 60 | 89.23 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 12 | 3 |
| 72 | 89.29 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 83 | 89.34 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 93 | 89.38 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 99 | 89.40 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 130 | 89.58 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 131 | 89.58 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 139 | 89.62 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 155 | 89.69 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 162 | 89.75 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 164 | 89.76 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 166 | 89.76 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 168 | 89.78 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 10 |
| 169 | 89.78 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 196 | 89.94 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 198 | 89.99 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 216 | 90.07 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 221 | 90.09 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 224 | 90.11 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 227 | 90.11 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 3 |
| 238 | 90.14 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 264 | 90.19 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 266 | 90.20 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 3 |
| 272 | 90.22 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 292 | 90.24 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 8 | 21 |
| 341 | 90.34 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 348 | 90.35 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 393 | 90.40 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 400 | 90.41 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 401 | 90.41 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 449 | 90.45 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 8 | 16 |
| 464 | 90.47 | temperature | 15.0 | 43200 | > th | dose dependent | sin | 23 | NA |
| 467 | 90.47 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 501 | 90.49 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 506 | 90.49 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 517 | 90.50 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 545 | 90.51 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 558 | 90.51 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 22 | 18 |
| 640 | 90.55 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 705 | 90.57 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 742 | 90.58 | temperature | 15.0 | 43200 | > th | dose dependent | no | NA | NA |
| 764 | 90.59 | wind | 7.0 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 802 | 90.59 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 11 | 23 |
| 825 | 90.61 | temperature | 20.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 980 | 90.68 | temperature | 20.0 | 43200 | < th | dose independent | sin | 10 | NA |