Os03g0373300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1110 family protein.
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Os03g0373300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1110 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 157.7 | 0.59 | 6.12 | 0.153 | 0.256 | 2.55 | 1.51 | -0.964 | -0.454 | 6.99 | 24.8 | 928 | -- | -- |
| 159 | 0.587 | 6.12 | 0.0959 | 0.293 | 2.71 | 1.4 | -- | -0.455 | 6.54 | 24.79 | 1019 | -- | -- |
| 162.61 | 0.594 | 6.12 | 0.176 | 0.352 | 2.61 | -- | -0.798 | -0.45 | 7.05 | 24.8 | 1083 | -- | -- |
| 163.36 | 0.595 | 6.13 | 0.0427 | 0.345 | 2.69 | -- | -- | -0.484 | 6.95 | 24.67 | 1067 | -- | -- |
| 166.29 | 0.601 | 6.13 | 0.104 | -- | 2.62 | -- | -0.493 | -0.46 | -- | 24.96 | 837 | -- | -- |
| 263.38 | 0.761 | 6.26 | -0.786 | 0.474 | -- | 0.966 | -- | -1.04 | 8.67 | -- | -- | -- | -- |
| 265.96 | 0.764 | 6.26 | -0.751 | 0.472 | -- | -- | -- | -1.04 | 9.41 | -- | -- | -- | -- |
| 166.61 | 0.601 | 6.14 | 0.0173 | -- | 2.67 | -- | -- | -0.48 | -- | 24.9 | 836 | -- | -- |
| 163.4 | 0.595 | 6.14 | -- | 0.344 | 2.68 | -- | -- | -0.492 | 6.97 | 24.62 | 1066 | -- | -- |
| 279.01 | 0.781 | 6.27 | -0.753 | -- | -- | -- | -- | -1.04 | -- | -- | -- | -- | -- |
| 280.81 | 0.784 | 6.24 | -- | 0.473 | -- | -- | -- | -0.953 | 9.53 | -- | -- | -- | -- |
| 166.61 | 0.601 | 6.14 | -- | -- | 2.66 | -- | -- | -0.483 | -- | 24.9 | 833 | -- | -- |
| 293.98 | 0.8 | 6.25 | -- | -- | -- | -- | -- | -0.951 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 158.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 10 |
| 2 | 158.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 12 |
| 4 | 158.91 | temperature | 25 | 1440 | < th | dose dependent | rect. | 14 | 15 |
| 6 | 158.92 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 22 |
| 11 | 159.02 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 22 |
| 15 | 159.04 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 27 | 159.27 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 28 | 159.28 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 29 | 159.31 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 40 | 159.52 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 46 | 159.70 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 57 | 159.86 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 101 | 160.47 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 125 | 160.94 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 280 | 163.10 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 349 | 164.22 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 357 | 164.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 447 | 165.69 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 716 | 167.93 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 730 | 168.06 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 798 | 168.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 813 | 168.54 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 947 | 169.28 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |