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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0371000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cytochrome P450.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.98 (0.0173) R2 : 0.0305
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.138 (0.0364) R2dN8 : 0.0394 R2N8 : 0.0305
σ : 0.325
deviance : 48.62
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
47.06 0.322 3 -0.215 0.154 -0.106 -0.309 0.365 0.0393 5.57 24.6 216 -- --
47.45 0.321 2.99 -0.101 0.15 -0.0895 -0.138 -- 0.0787 5.55 24.6 204 -- --
47.25 0.32 3 -0.187 0.154 -0.107 -- 0.266 0.0483 5.45 24.56 211 -- --
47.47 0.321 2.99 -0.103 0.149 -0.0927 -- -- 0.0776 5.36 24.58 182 -- --
48.15 0.323 3 -0.168 -- -0.0453 -- 0.257 0.0799 -- 24.5 196 -- --
47.88 0.324 2.98 -0.0713 0.1 -- -0.194 -- 0.127 6.23 -- -- -- --
47.97 0.324 2.98 -0.0736 0.0994 -- -- -- 0.128 5.99 -- -- -- --
48.37 0.325 2.99 -0.0817 -- -0.0364 -- -- 0.11 -- 24.58 182 -- --
47.74 0.322 2.99 -- 0.142 -0.0781 -- -- 0.0909 5.43 24.6 182 -- --
48.49 0.325 2.98 -0.0707 -- -- -- -- 0.13 -- -- -- -- --
48.12 0.324 2.98 -- 0.0983 -- -- -- 0.136 6.03 -- -- -- --
48.35 0.324 2.98 -- -- 0.058 -- -- 0.148 -- 26.6 196 -- --
48.62 0.325 2.98 -- -- -- -- -- 0.138 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 42.97 wind 9.0 90 > th dose independent rect. 13 2
2 42.97 wind 9.0 90 > th dose dependent rect. 13 2
5 42.99 wind 9.0 10 > th dose independent rect. 13 1
17 42.99 wind 9.0 10 > th dose dependent rect. 13 1
47 44.34 radiation 30.0 10 > th dose independent rect. 13 1
52 44.56 atmosphere 1005.0 90 > th dose dependent rect. 2 1
57 44.74 radiation 20.0 10 > th dose dependent rect. 13 1
60 44.80 atmosphere 1005.0 10 > th dose dependent rect. 2 2
62 44.83 radiation 40.0 30 > th dose dependent rect. 13 1
87 44.95 atmosphere 1005.0 90 > th dose independent rect. 2 1
92 45.05 radiation 10.0 43200 < th dose dependent rect. 3 1
93 45.06 wind 9.0 1440 < th dose independent rect. 3 1
94 45.06 temperature 10.0 1440 > th dose independent rect. 3 1
97 45.06 temperature 30.0 1440 < th dose independent rect. 3 1
101 45.06 humidity 50.0 1440 > th dose independent rect. 3 1
110 45.06 atmosphere 995.0 1440 > th dose independent rect. 3 1
111 45.06 radiation 1.0 1440 < th dose independent rect. 3 1
131 45.06 temperature 10.0 1440 > th dose independent rect. 4 23
135 45.06 radiation 1.0 1440 < th dose dependent rect. 3 1
152 45.07 temperature 20.0 30 > th dose independent rect. 2 1
156 45.08 temperature 20.0 30 > th dose dependent rect. 2 1
161 45.10 wind 3.0 30 < th dose independent rect. 2 1
165 45.11 humidity 80.0 30 > th dose independent rect. 2 1
167 45.11 wind 5.0 30 < th dose dependent rect. 2 1
171 45.12 temperature 10.0 30 > th dose independent rect. 2 1
173 45.12 temperature 25.0 30 < th dose independent rect. 2 1
175 45.12 humidity 50.0 30 > th dose independent rect. 2 1
179 45.12 atmosphere 1010.0 30 < th dose independent rect. 2 1
181 45.12 radiation 1.0 30 < th dose independent rect. 2 1
186 45.12 precipitation 0.1 30 < th dose independent rect. 2 1
187 45.12 temperature 10.0 30 > th dose independent rect. 3 23
189 45.12 humidity 50.0 30 > th dose dependent rect. 2 1
191 45.12 radiation 1.0 30 < th dose dependent rect. 2 1
196 45.12 precipitation 0.1 30 < th dose dependent rect. 2 1
208 45.18 atmosphere 1015.0 30 < th dose dependent rect. 2 1
209 45.19 wind 1.0 30 > th dose independent rect. 2 1
212 45.20 temperature 30.0 30 < th dose dependent rect. 2 1
215 45.22 atmosphere 1000.0 30 > th dose independent rect. 3 23
219 45.23 temperature 25.0 90 > th dose dependent rect. 1 3
228 45.28 precipitation 0.1 30 < th dose independent rect. 3 23
231 45.28 precipitation 0.1 30 < th dose dependent rect. 3 23
232 45.29 humidity 90.0 90 < th dose independent rect. 2 1
303 45.57 wind 9.0 30 < th dose independent rect. 3 23
350 45.66 radiation 40.0 10 < th dose independent sin 13 NA
386 45.80 humidity 50.0 30 > th dose independent rect. 3 23
418 45.93 wind 1.0 30 < th dose independent rect. 10 1
419 45.93 temperature 10.0 1440 > th dose independent rect. 11 1
423 45.93 atmosphere 995.0 1440 > th dose independent rect. 11 1
426 45.93 precipitation 0.1 1440 < th dose independent rect. 11 1
427 45.93 temperature 10.0 1440 > th dose independent rect. 12 23
430 45.93 wind 1.0 30 < th dose dependent rect. 10 1
431 45.93 precipitation 0.1 1440 < th dose dependent rect. 11 1
445 46.01 humidity 70.0 30 < th dose independent rect. 10 1
447 46.01 temperature 25.0 30 > th dose dependent rect. 10 1
468 46.06 atmosphere 1010.0 30 < th dose independent rect. 10 1
474 46.08 humidity 70.0 30 < th dose independent rect. 13 1
480 46.11 temperature 25.0 30 > th dose independent rect. 10 1
482 46.11 humidity 70.0 30 < th dose dependent rect. 10 1
494 46.15 radiation 20.0 30 > th dose independent rect. 10 1
500 46.17 radiation 40.0 30 < th dose independent rect. 10 1
514 46.20 atmosphere 1005.0 30 > th dose independent rect. 10 1
522 46.21 precipitation 0.1 720 < th dose independent rect. 15 23
525 46.21 precipitation 0.1 720 < th dose dependent rect. 15 23
539 46.25 wind 5.0 30 < th dose dependent rect. 10 1
541 46.25 atmosphere 995.0 30 > th dose dependent rect. 10 1
543 46.26 humidity 60.0 30 > th dose independent rect. 10 1
552 46.27 temperature 30.0 30 < th dose independent rect. 10 1
554 46.27 humidity 90.0 90 < th dose independent rect. 1 4
558 46.28 temperature 10.0 30 > th dose independent rect. 10 1
566 46.28 precipitation 0.1 30 < th dose independent rect. 10 1
567 46.28 radiation 40.0 30 < th dose independent rect. 14 12
568 46.28 temperature 10.0 30 > th dose independent rect. 11 23
570 46.28 precipitation 0.1 30 < th dose dependent rect. 10 1
593 46.29 wind 1.0 30 > th dose independent rect. 10 1
599 46.30 atmosphere 995.0 720 > th dose independent rect. 14 1
604 46.31 precipitation 0.1 720 < th dose independent rect. 2 1
606 46.31 wind 9.0 30 < th dose independent rect. 14 12
607 46.31 atmosphere 995.0 720 > th dose independent rect. 3 23
608 46.31 precipitation 0.1 720 < th dose dependent rect. 2 1
613 46.33 wind 9.0 30 < th dose independent rect. 2 12
614 46.33 precipitation 0.1 30 < th dose independent rect. 2 12
615 46.33 radiation 1.0 30 > th dose dependent rect. 10 1
618 46.33 precipitation 0.1 30 < th dose dependent rect. 2 12
632 46.34 humidity 50.0 30 > th dose independent rect. 14 12
633 46.34 atmosphere 995.0 30 > th dose independent rect. 14 12
646 46.35 temperature 10.0 1440 > th dose independent rect. 3 12
649 46.35 temperature 10.0 1440 > th dose independent rect. 15 12
652 46.35 humidity 50.0 30 > th dose independent rect. 2 12
653 46.35 atmosphere 1010.0 30 < th dose independent rect. 2 12
657 46.36 precipitation 0.1 720 < th dose independent rect. 14 1
658 46.36 temperature 10.0 30 > th dose independent rect. 2 12
660 46.36 temperature 10.0 30 > th dose independent rect. 14 12
661 46.36 atmosphere 995.0 30 > th dose independent rect. 2 12
665 46.36 precipitation 0.1 30 < th dose independent rect. 14 12
666 46.36 precipitation 0.1 720 < th dose dependent rect. 14 1
668 46.36 precipitation 0.1 30 < th dose dependent rect. 14 12
669 46.36 radiation 20.0 10 < th dose dependent rect. 5 21
670 46.37 temperature 10.0 720 > th dose independent rect. 14 1
671 46.37 atmosphere 1015.0 720 < th dose independent rect. 14 1
676 46.37 temperature 10.0 720 > th dose independent rect. 15 23
678 46.37 radiation 40.0 30 < th dose dependent rect. 10 1
694 46.40 wind 1.0 720 > th dose independent rect. 14 1
695 46.40 wind 9.0 720 < th dose independent rect. 14 1
702 46.41 radiation 40.0 1440 > th dose dependent rect. 15 1
721 46.42 radiation 40.0 30 < th dose independent rect. 12 14
722 46.42 atmosphere 1015.0 30 < th dose dependent rect. 10 1
728 46.43 radiation 40.0 30 > th dose dependent sin 13 NA
729 46.43 humidity 80.0 30 < th dose dependent rect. 13 1
735 46.44 radiation 40.0 10 < th dose dependent rect. 14 12
740 46.45 atmosphere 995.0 720 > th dose independent rect. 15 23
745 46.46 radiation 40.0 1440 > th dose independent rect. 15 1
796 46.47 temperature 30.0 30 < th dose independent rect. 3 23
803 46.47 temperature 10.0 30 > th dose dependent rect. 2 12
825 46.48 radiation 40.0 10 < th dose dependent rect. 12 14
835 46.49 radiation 10.0 10 < th dose independent rect. 14 12
861 46.50 radiation 10.0 10 < th dose independent rect. 12 14
862 46.50 humidity 50.0 30 > th dose dependent rect. 10 1
900 46.53 radiation 10.0 10 < th dose independent rect. 5 21
903 46.53 wind 1.0 30 > th dose dependent rect. 10 1
913 46.53 humidity 50.0 30 > th dose dependent rect. 3 23
915 46.54 temperature 30.0 30 < th dose independent rect. 2 12
924 46.55 humidity 70.0 10 > th dose independent rect. 4 22
926 46.55 radiation 20.0 10 < th dose dependent rect. 12 14
929 46.56 atmosphere 1015.0 720 < th dose independent rect. 2 1
933 46.56 wind 9.0 720 < th dose dependent rect. 2 1
941 46.57 humidity 50.0 10 > th dose independent rect. 16 10
949 46.58 precipitation 0.1 10 < th dose independent rect. 2 14
956 46.58 precipitation 0.1 10 < th dose dependent rect. 2 14
959 46.59 temperature 25.0 30 > th dose independent rect. 13 1
961 46.59 atmosphere 995.0 10 > th dose independent rect. 16 10
978 46.60 temperature 10.0 10 > th dose independent rect. 16 10
979 46.60 radiation 40.0 10 < th dose independent rect. 16 10
980 46.60 precipitation 0.1 10 < th dose independent rect. 16 10
981 46.60 temperature 10.0 10 > th dose independent rect. 2 14
983 46.60 atmosphere 1015.0 10 < th dose independent rect. 2 14
989 46.60 precipitation 0.1 10 < th dose dependent rect. 16 10
1000 46.61 wind 9.0 10 < th dose independent rect. 16 10